OMP ST:434 ! Escherichia coli K-12 RP4335

From OMPwiki

Strain Summary

Strain Name

Escherichia coli K-12 RP4335

Synonyms
Taxon Information
  • Pangenome: Escherichia coli
  • Subspecies and/or strain: K-12
  • NCBI Taxonomy ID: 83333
Genotype

F- thr leu his metF DE(gal-attLambda) eda strA cheX239

Strain Reference

PMID:365256[1]

Strain availability
Ancestry

parent:OMP ST:430 ! Escherichia coli K-12 RP487

Annotated phenotypes



Notes

Phenotype Annotation

Annotation ID not OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:433

Counter clockwise flagella rotation

Relative to: OMP_AN:429


Genotype differences:

+cheX239


Condition differences:

no differences

  • temperature:35C
  • medium:motility buffer
ECO:0000181

in vitro assay evidence

PMID:365356[2]

Tethering assay

OMP_AN:456

OMP:0007005

decreased negative chemotaxis

Relative to: OMP_AN:436


Genotype differences:

+cheX239


Condition differences:

no differences

  • temperature:35C
  • medium:leucine (10^-2 M)
  • medium:motility buffer
ECO:0000181

in vitro assay evidence

PMID:365356[2]

CHEBI:25017 leucine

Tethering assay

OMP_AN:457

OMP:0007005

decreased negative chemotaxis

Relative to: OMP_AN:437


Genotype differences:

+cheX239


Condition differences:

no differences

  • temperature:35C
  • medium:acetate (10^-2 M)
  • medium:motility buffer
ECO:0000181

in vitro assay evidence

PMID:365356[2]

CHEBI:30089 acetate

Tethering assay

OMP_AN:458

OMP:0007005

decreased negative chemotaxis

Relative to: OMP_AN:438


Genotype differences:

+cheX239


Condition differences:

no differences

  • temperature:35C
  • medium:motility buffer
  • medium:salicylate (10^-3 M)
ECO:0000181

in vitro assay evidence

PMID:365356[2]

CHEBI:30762 salicylate

Tethering assay

OMP_AN:459

OMP:0007005

decreased negative chemotaxis

Relative to: OMP_AN:439


Genotype differences:

+cheX239


Condition differences:

no differences

  • temperature:35C
  • medium:indole (2.5 x 10^-4 M)
  • medium:motility buffer
ECO:0000181

in vitro assay evidence

PMID:365356[2]

CHEBI:35581 indole

Tethering assay

OMP_AN:460

OMP:0007005

decreased negative chemotaxis

Relative to: OMP_AN:440


Genotype differences:

+cheX239


Condition differences:

no differences

  • temperature:35C
  • medium:Co++ (10^-4 M)
  • medium:motility buffer
ECO:0000181

in vitro assay evidence

PMID:365356[2]

CHEBI:48848 Co++

Tethering assay

OMP_AN:479

OMP:0007041

decreased positive chemotaxis

Relative to: OMP_AN:471


Genotype differences:

+cheX239


Condition differences:

no differences

  • temperature:35C
  • medium:aspartate
  • medium:motility buffer
ECO:0000181

in vitro assay evidence

PMID:365356[2]

Tethering assay Decreased aspartate concentration 10^-5 M -> 0 M

OMP_AN:480

OMP:0007041

decreased positive chemotaxis

Relative to: OMP_AN:472


Genotype differences:

+cheX239


Condition differences:

no differences

  • temperature:35C
  • medium:motility buffer
  • medium:serine
ECO:0000181

in vitro assay evidence

PMID:365356[2]

CHEBI:17822

Tethering assay Decreased serine concentration 10^-5 M -> 0 M



Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. Kroner, KH et al. (1978) Technical aspects of separation using aqueous two-phase systems in enzyme isolation processes. Biotechnol. Bioeng. 20 1967-88 PubMed OMPwiki page
  2. 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 Parkinson, JS & Revello, PT (1978) Sensory adaptation mutants of E. coli. Cell 15 1221-30 PubMed OMPwiki page