OMP ST:1088 ! Escherichia coli K-12 JW2408
Contents
Strain Summary
Strain Name |
Escherichia coli K-12 JW2408 |
---|---|
Synonyms |
JW2408-2 |
Taxon Information |
|
Genotype |
DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 ptsH744(del)::kan |
Strain Reference | |
Strain availability | |
Ancestry | |
Annotated phenotypes |
|
Notes
Phenotype Annotation
Annotation ID | Qualifier | OMP ID | OMP term name | Relative phenotype information | Experimental condition | ECO ID | ECO term name | Reference | Annotation Extension | Notes |
---|---|---|---|---|---|---|---|---|---|---|
OMP_AN:1000 |
OMP:0007092 |
decreased cell motility by swarming |
Relative to: OMP_AN:881 Genotype differences: +DE(araD-araB)567 +DE(rhaD-rhaB)568 +hsdR514 +lacZ4787(del)( +ptsH744(del) -IN(rrnD-rrnE)1 Condition differences: no differences |
|
ECO:0005803 |
motility assay evidence |
||||
OMP_AN:31652 |
OMP:0007896 |
decreased resistance to a surfactant |
Relative to: OMP_AN:27581 Genotype differences: +lacZ4787(del)( +ptsH744(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:3020) Benzalkonium chloride |
| ||
OMP_AN:31653 |
OMP:0007075 |
decreased growth factor requirement |
Relative to: OMP_AN:27606 Genotype differences: +lacZ4787(del)( +ptsH744(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:506227) N-Acetyl-D-glucosamine |
| ||
OMP_AN:31654 |
OMP:0007070 |
decreased organic carbon source utilization |
Relative to: OMP_AN:27616 Genotype differences: +lacZ4787(del)( +ptsH744(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:506227) N-Acetyl-D-glucosamine |
| ||
OMP_AN:31655 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27590 Genotype differences: +lacZ4787(del)( +ptsH744(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:6093162 + CHEBI:4170) Fosfomycin (CID:6093162) +Glucose-6-phosphate (CHEBI:4170) |
| ||
OMP_AN:31656 |
OMP:0007075 |
decreased growth factor requirement |
Relative to: OMP_AN:27603 Genotype differences: +lacZ4787(del)( +ptsH744(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:42758) D-Glucose anhydrous |
| ||
OMP_AN:31657 |
OMP:0007070 |
decreased organic carbon source utilization |
Relative to: OMP_AN:27613 Genotype differences: +lacZ4787(del)( +ptsH744(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:42758) D-Glucose anhydrous |
| ||
OMP_AN:31658 |
OMP:0007075 |
decreased growth factor requirement |
Relative to: OMP_AN:27605 Genotype differences: +lacZ4787(del)( +ptsH744(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:23615261) D-(+) Maltose monohydrate |
| ||
OMP_AN:31659 |
OMP:0007070 |
decreased organic carbon source utilization |
Relative to: OMP_AN:27615 Genotype differences: +lacZ4787(del)( +ptsH744(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:23615261) D-(+) Maltose monohydrate |
| ||
OMP_AN:31660 |
OMP:0006045 |
increased resistance to beta-lactam compound |
Relative to: OMP_AN:27537 Genotype differences: +lacZ4787(del)( +ptsH744(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:51208) Mecillinam |
| ||
OMP_AN:31661 |
OMP:0007075 |
decreased growth factor requirement |
Relative to: OMP_AN:27600 Genotype differences: +lacZ4787(del)( +ptsH744(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:31206) NH4Cl |
| ||
OMP_AN:31662 |
OMP:0007032 |
decreased utilization of inorganic nitrogen source |
Relative to: OMP_AN:27610 Genotype differences: +lacZ4787(del)( +ptsH744(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:31206) NH4Cl |
| ||
OMP_AN:31663 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27503 Genotype differences: +lacZ4787(del)( +ptsH744(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:71415) Nitrofurantoin |
| ||
OMP_AN:31664 |
OMP:0007249 |
decreased resistance to a chemical |
Relative to: OMP_AN:27573 Genotype differences: +lacZ4787(del)( +ptsH744(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:8431) Procaine hydrochloride |
| ||
OMP_AN:31665 |
OMP:0007878 |
increased resistance to an antimicrobial agent |
Relative to: OMP_AN:27546 Genotype differences: +lacZ4787(del)( +ptsH744(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:8653) Pyocyanin |
| ||
OMP_AN:31666 |
OMP:0007912 |
decreased resistance to a chelator |
Relative to: OMP_AN:27508 Genotype differences: +lacZ4787(del)( +ptsH744(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:30740) EGTA |
| ||
OMP_AN:31667 |
OMP:0006057 |
decreased resistance to aminoglycoside |
Relative to: OMP_AN:27527 Genotype differences: +lacZ4787(del)( +ptsH744(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:9217) Spectinomycin dihydrochloride pentahydrate |
| ||
Additional Information
Links
References
See Help:References for how to manage references in OMPwiki.
- ↑ Inoue, T et al. (2007) Genome-wide screening of genes required for swarming motility in Escherichia coli K-12. J. Bacteriol. 189 950-7 PubMed OMPwiki page
- ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 2.11 2.12 2.13 2.14 2.15 Nichols, RJ et al. (2011) Phenotypic landscape of a bacterial cell. Cell 144 143-56 PubMed OMPwiki page
e
o
- OMP:0006045 ! increased resistance to beta-lactam compound
- OMP:0006057 ! decreased resistance to aminoglycoside
- OMP:0007032 ! decreased utilization of inorganic nitrogen source
- OMP:0007070 ! decreased organic carbon source utilization
- OMP:0007075 ! decreased growth factor requirement
- OMP:0007092 ! decreased motility by swarming
- OMP:0007249 ! decreased resistance to a chemical
- OMP:0007878 ! increased resistance to an antimicrobial agent
- OMP:0007879 ! decreased resistance to an antimicrobial agent
- OMP:0007896 ! decreased resistance to a surfactant
- OMP:0007912 ! decreased resistance to a chelator