OMP ST:1086 ! Escherichia coli K-12 JW0662

Strain Summary

Strain Name	Escherichia coli K-12 JW0662
Synonyms	JW0662-2
Taxon Information	Pangenome: Escherichia coli Subspecies and/or strain: K-12 NCBI Taxonomy ID: 83333
Genotype	DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 nagC725(del)::kan
Strain Reference	Coli Genetic Stock Center
Strain availability	Coli Genetic Stock Center
Ancestry	parent:OMP ST:800 ! Escherichia coli K-12 BW25113
Annotated phenotypes
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Phenotype Annotation

Annotation ID	Qualifier	OMP ID	OMP term name	Relative phenotype information	Experimental condition	ECO ID	ECO term name	Reference	Annotation Extension	Notes
OMP_AN:998		OMP:0007092	decreased cell motility by swarming	Relative to: OMP_AN:881 Genotype differences: +DE(araD-araB)567 +DE(rhaD-rhaB)568 +hsdR514 +lacZ4787(del)( +nagC725(del) -IN(rrnD-rrnE)1 Condition differences: no differences	temperature:33C medium:swarming motility medium	ECO:0005803	motility assay evidence	PMID:17122336
OMP_AN:28971		OMP:0007879	decreased resistance to an antimicrobial agent	Relative to: OMP_AN:27549 Genotype differences: +lacZ4787(del)( +nagC725(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:CHIR-090	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:134107 CID:11546620) CHIR-090	chemical concentration= 0.075 ug/ml normalized fitness= -3.86
OMP_AN:28972		OMP:0007249	decreased resistance to a chemical	Relative to: OMP_AN:27573 Genotype differences: +lacZ4787(del)( +nagC725(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Procaine hydrochloride	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:8431) Procaine hydrochloride	chemical concentration= 10 mM normalized fitness= -3.91
OMP_AN:28973		OMP:0006041	increased resistance to quinolone	Relative to: OMP_AN:27543 Genotype differences: +lacZ4787(del)( +nagC725(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Streptonigrin	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:9287) Streptonigrin	chemical concentration= 0.5 ug/ml normalized fitness= 3.84
OMP_AN:28974		OMP:0007878	increased resistance to an antimicrobial agent	Relative to: OMP_AN:27544 Genotype differences: +lacZ4787(del)( +nagC725(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Chloramphenicol	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:17698) Chloramphenicol	chemical concentration= 0.5 ug/ml normalized fitness= 3.79
OMP_AN:28975		OMP:0007249	decreased resistance to a chemical	Relative to: OMP_AN:27569 Genotype differences: +lacZ4787(del)( +nagC725(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:EtOH	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:16236) EtOH	chemical concentration= 6 % normalized fitness= -4.94
OMP_AN:28976		OMP:0007520	increased population growth in high osmolarity	Relative to: OMP_AN:27595 Genotype differences: +lacZ4787(del)( +nagC725(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:NaCl	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:26710) NaCl	chemical concentration= 600 mM normalized fitness= 4.51
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References

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