OMP ST:1051 ! Escherichia coli K-12 JW3305

Strain Summary

Strain Name	Escherichia coli K-12 JW3305
Synonyms	JW3305-1
Taxon Information	Pangenome: Escherichia coli Subspecies and/or strain: K-12 NCBI Taxonomy ID: 83333
Genotype	DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 yheL750(del)::kan
Strain Reference	Coli Genetic Stock Center
Strain availability	Coli Genetic Stock Center
Ancestry	parent:OMP ST:800 ! Escherichia coli K-12 BW25113
Annotated phenotypes
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Phenotype Annotation

Annotation ID	Qualifier	OMP ID	OMP term name	Relative phenotype information	Experimental condition	ECO ID	ECO term name	Reference	Annotation Extension	Notes
OMP_AN:963		OMP:0007092	decreased cell motility by swarming	Relative to: OMP_AN:881 Genotype differences: +DE(araD-araB)567 +DE(rhaD-rhaB)568 +hsdR514 +lacZ4787(del)( +yheL750(del) -IN(rrnD-rrnE)1 Condition differences: no differences	temperature:33C medium:swarming motility medium	ECO:0005803	motility assay evidence	PMID:17122336
OMP_AN:33334		OMP:0007954	decreased population growth at high temperature	Relative to: OMP_AN:27621 Genotype differences: +lacZ4787(del)( +yheL750(del) -lacZ4787(del) Condition differences: temperature:45C medium37C medium	temperature:45C medium:LB agar medium:High temperature	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072		chemical concentration= 45 C normalized fitness= -3.81
OMP_AN:33335		OMP:0006044	decreased resistance to beta-lactam	Relative to: OMP_AN:27531 Genotype differences: +lacZ4787(del)( +yheL750(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Ampicillin	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:28971) Ampicillin	chemical concentration= 8 ug/ml normalized fitness= -3.43
OMP_AN:33336		OMP:0007249	decreased resistance to a chemical	Relative to: OMP_AN:27509 Genotype differences: +lacZ4787(del)( +yheL750(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Cisplatin-cis-Diamineplatinum(II) dichloride	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:27899) Cisplatin-cis-Diamineplatinum(II) dichloride	chemical concentration= 50 ug/ml normalized fitness= -3.31
OMP_AN:33337		OMP:0007886	decreased resistance to a metal	Relative to: OMP_AN:27579 Genotype differences: +lacZ4787(del)( +yheL750(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Copper stress-CuCl2 dihydrate	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:86318) Copper stress-CuCl2 dihydrate	chemical concentration= 2 mM (LB) normalized fitness= -3.8
OMP_AN:33338		OMP:0007886	decreased resistance to a metal	Relative to: OMP_AN:27580 Genotype differences: +lacZ4787(del)( +yheL750(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Nickel stress-Ni(II)Cl2 hexahydrate	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:53542) Nickel stress-Ni(II)Cl2 hexahydrate	chemical concentration= 1 mM (LB) normalized fitness= -3.65
OMP_AN:33339		OMP:0007879	decreased resistance to an antimicrobial agent	Relative to: OMP_AN:27566 Genotype differences: +lacZ4787(del)( +yheL750(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Vancomycin HCl hydrate	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:9932) Vancomycin HCl hydrate	chemical concentration= 50 ug/ml normalized fitness= -3.27
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References

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