OMP ST:795 ! Escherichia coli K-12 AW539
Contents
Strain Summary
| Strain Name |
AW539 |
|---|---|
| Synonyms | |
| Taxon Information |
|
| Genotype |
Lambda- araC14 fhuA31 galK2(Oc) galT22 glnX44(AS) hisG4(Oc) lacY1 leuB6(Am) mgl-51 mtl-1 rfbC1 rpsL136(StrR) tar thiE1 thr-1 tsx-78 xylA5 |
| Strain Reference | |
| Strain availability | |
| Ancestry | |
| Annotated phenotypes |
|
Notes
Phenotype Annotation
| Annotation ID | not | OMP ID | OMP term name | Relative phenotype information | Experimental condition | ECO ID | ECO term name | Reference | Annotation Extension | Notes |
|---|---|---|---|---|---|---|---|---|---|---|
|
OMP_AN:104 |
OMP:0007041 |
decreased positive chemotaxis |
Relative to: OMP_AN:102 Genotype differences: +tar Condition differences: no differences |
|
ECO:0005608 |
tumble frequency assay evidence |
CHEBI:17306 maltose |
|||
|
OMP_AN:106 |
OMP:0007041 |
decreased positive chemotaxis |
Relative to: OMP_AN:105 Genotype differences: +tar Condition differences: no differences |
|
ECO:0005608 |
tumble frequency assay evidence |
CHEBI:22660 aspartic acid |
|||
|
OMP_AN:351 |
OMP:0007005 |
decreased negative chemotaxis |
Relative to: OMP_AN:407 Genotype differences: +tar Condition differences: no differences |
|
ECO:0005608 |
tumble frequency assay evidence |
||||
|
OMP_AN:352 |
OMP:0007005 |
decreased negative chemotaxis |
Relative to: OMP_AN:408 Genotype differences: +tar Condition differences: no differences |
|
ECO:0005608 |
tumble frequency assay evidence |
CHEBI:48828 Co(II) |
|||
|
OMP_AN:501 |
OMP:0007041 |
decreased positive chemotaxis |
Relative to: OMP_AN:493 Genotype differences: +tar Condition differences: no differences |
|
ECO:0005609 |
capillary assay evidence |
CHEBI:16643 methionine |
|||
|
OMP_AN:502 |
OMP:0007041 |
decreased positive chemotaxis |
Relative to: OMP_AN:485 Genotype differences: +tar Condition differences: no differences |
|
ECO:0005609 |
in vitro assay evidence |
CHEBI:17053 aspartate |
|||
|
OMP_AN:503 |
OMP:0007041 |
decreased positive chemotaxis |
Relative to: OMP_AN:490 Genotype differences: +tar Condition differences: no differences |
|
ECO:0005609 |
capillary assay evidence |
||||
|
OMP_AN:523 |
OMP:0000054 |
absence of positive chemotaxis |
Relative to: OMP_AN:516 Genotype differences: +tar Condition differences: no differences |
|
ECO:0005609 |
capillary assay evidence |
CHEBI:17364 D-aspartate |
|||
|
OMP_AN:524 |
OMP:0000054 |
absence of positive chemotaxis |
Relative to: OMP_AN:517 Genotype differences: +tar Condition differences: no differences |
|
ECO:0005609 |
capillary assay evidence |
CHEBI:34018 S-AMPA |
|||
|
OMP_AN:525 |
OMP:0000054 |
absence of positive chemotaxis |
Relative to: OMP_AN:522 Genotype differences: +tar Condition differences: no differences |
|
ECO:0005609 |
capillary assay evidence |
||||
|
OMP_AN:534 |
OMP:0000054 |
absence of positive chemotaxis |
Relative to: OMP_AN:529 Genotype differences: +tar Condition differences: no differences |
|
ECO:0005609 |
capillary assay evidence |
||||
|
OMP_AN:535 |
OMP:0000054 |
absence of positive chemotaxis |
Relative to: OMP_AN:530 Genotype differences: +tar Condition differences: no differences |
|
ECO:0005609 |
capillary assay evidence |
||||
|
OMP_AN:570 |
OMP:0007041 |
decreased positive chemotaxis |
Relative to: OMP_AN:542 Genotype differences: +tar Condition differences: no differences |
|
ECO:0005609 |
capillary assay evidence |
CHEBI:17053 L-aspartate |
Synthetic amino acid | ||
|
OMP_AN:571 |
OMP:0007041 |
decreased positive chemotaxis |
Relative to: OMP_AN:549 Genotype differences: +tar Condition differences: no differences |
|
ECO:0005609 |
capillary assay evidence |
CHEBI:16643 L-methionine |
Synthetic amino acid | ||
|
OMP_AN:597 |
OMP:0007041 |
decreased positive chemotaxis |
Relative to: OMP_AN:572 Genotype differences: +tar Condition differences: no differences |
|
ECO:0005609 |
capillary assay evidence |
CHEBI:31206 NH4Cl |
Salt chemotaxis | ||
|
OMP_AN:598 |
OMP:0007041 |
decreased positive chemotaxis |
Relative to: OMP_AN:573 Genotype differences: +tar Condition differences: no differences |
|
ECO:0005609 |
capillary assay evidence |
CHEBI:48607 LiCl |
Salt chemotaxis | ||
|
OMP_AN:599 |
OMP:0007041 |
decreased positive chemotaxis |
Relative to: OMP_AN:574 Genotype differences: +tar Condition differences: no differences |
|
ECO:0005609 |
capillary assay evidence |
CHEBI:26710 NaCl |
Salt chemotaxis | ||
|
OMP_AN:600 |
OMP:0007041 |
decreased positive chemotaxis |
Relative to: OMP_AN:575 Genotype differences: +tar Condition differences: no differences |
|
ECO:0005609 |
capillary assay evidence |
CHEBI:32588 KCl |
Salt chemotaxis | ||
|
OMP_AN:601 |
OMP:0007041 |
decreased positive chemotaxis |
Relative to: OMP_AN:576 Genotype differences: +tar Condition differences: no differences |
|
ECO:0005609 |
capillary assay evidence |
Salt chemotaxis | |||
|
OMP_AN:602 |
OMP:0007041 |
decreased positive chemotaxis |
Relative to: OMP_AN:577 Genotype differences: +tar Condition differences: no differences |
|
ECO:0005609 |
capillary assay evidence |
Salt chemotaxis | |||
|
OMP_AN:603 |
OMP:0007041 |
decreased positive chemotaxis |
Relative to: OMP_AN:578 Genotype differences: +tar Condition differences: no differences |
|
ECO:0005609 |
capillary assay evidence |
CHEBI:6636 MgCl2 |
Salt chemotaxis | ||
|
OMP_AN:604 |
OMP:0007041 |
decreased positive chemotaxis |
Relative to: OMP_AN:580 Genotype differences: +tar Condition differences: no differences |
|
ECO:0005609 |
capillary assay evidence |
CHEBI:63317 BaCl2 |
Salt chemotaxis | ||
|
OMP_AN:605 |
OMP:0007041 |
decreased positive chemotaxis |
Relative to: OMP_AN:581 Genotype differences: +tar Condition differences: no differences |
|
ECO:0005609 |
capillary assay evidence |
CHEBI:3312 CaCl2 |
Salt chemotaxis | ||
|
OMP_AN:646 |
OMP:0007092 |
decreased cell motility by swarming |
Relative to: OMP_AN:645 Genotype differences: +tar Condition differences: no differences |
|
ECO:0000181 |
in vitro assay evidence |
CHEBI:18315 pyrroloquinoline quinone (PQQ) |
Temperature not stated. PQQ concentration inferred by curator. | ||
Additional Information
Links
References
See Help:References for how to manage references in OMPwiki.
- ↑ 1.0 1.1 1.2 1.3 1.4 Springer, MS et al. (1977) Sensory transduction in Escherichia coli: two complementary pathways of information processing that involve methylated proteins. Proc. Natl. Acad. Sci. U.S.A. 74 3312-6 PubMed OMPwiki page
- ↑ 2.0 2.1 2.2 2.3 Mesibov, R & Adler, J (1972) Chemotaxis toward amino acids in Escherichia coli. J. Bacteriol. 112 315-26 PubMed OMPwiki page
- ↑ Armstrong, JB & Adler, J (1967) Genetics of motility in Escherichia coli: complementation of paralysed mutants. Genetics 56 363-73 PubMed OMPwiki page
- ↑ 4.0 4.1 4.2 4.3 4.4 Lake, EM et al. (1995) Analogue of aspartate and glutamate active at synapses are attractants for Escherichia coli. Cell. Mol. Neurobiol. 15 283-8 PubMed OMPwiki page
- ↑ 5.0 5.1 Hedblom, ML & Adler, J (1983) Chemotactic response of Escherichia coli to chemically synthesized amino acids. J. Bacteriol. 155 1463-6 PubMed OMPwiki page
- ↑ 6.0 6.1 6.2 6.3 6.4 6.5 6.6 6.7 6.8 Qi, YL & Adler, J (1989) Salt taxis in Escherichia coli bacteria and its lack in mutants. Proc. Natl. Acad. Sci. U.S.A. 86 8358-62 PubMed OMPwiki page
- ↑ de Jonge, R et al. (1996) Pyrroloquinoline quinone, a chemotactic attractant for Escherichia coli. J. Bacteriol. 178 1224-6 PubMed OMPwiki page
