OMP ST:71069 ! Escherichia coli K-12 BW25113 pheS::SPA-kan

Strain Summary

Strain Name	Escherichia coli K-12 BW25113 pheS::SPA-kan
Synonyms
Taxon Information	Pangenome: Escherichia coli Subspecies and/or strain: K-12 NCBI Taxonomy ID: 83333
Genotype	DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 pheS::SPA-kan
Strain Reference	PMID:21185072
Strain availability
Ancestry	parent:OMP ST:800 ! Escherichia coli K-12 BW25113
Annotated phenotypes
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Phenotype Annotation

Annotation ID	Qualifier	OMP ID	OMP term name	Relative phenotype information	Experimental condition	ECO ID	ECO term name	Reference	Annotation Extension	Notes
OMP_AN:37494		OMP:0006057	decreased resistance to aminoglycoside	Relative to: OMP_AN:27525 Genotype differences: +lacZ4787(del)( +pheS -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Amikacin sulfate salt (disulfate)	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:2638) Amikacin sulfate salt (disulfate)	chemical concentration= 0.1 ug/ml normalized fitness= -5.43
OMP_AN:37495		OMP:0006044	decreased resistance to beta-lactam	Relative to: OMP_AN:27531 Genotype differences: +lacZ4787(del)( +pheS -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Ampicillin	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:28971) Ampicillin	chemical concentration= 1 ug/ml normalized fitness= -4.65
OMP_AN:37496		OMP:0007879	decreased resistance to an antimicrobial agent	Relative to: OMP_AN:27561 Genotype differences: +lacZ4787(del)( +pheS -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Bleomycin sulfate	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:34582) Bleomycin sulfate	chemical concentration= 2 ug/ml normalized fitness= -3.81
OMP_AN:37497		OMP:0007879	decreased resistance to an antimicrobial agent	Relative to: OMP_AN:27550 Genotype differences: +lacZ4787(del)( +pheS -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Ethidium Bromide	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:4883) Ethidium Bromide	chemical concentration= 10 ug/ml normalized fitness= -4.63
OMP_AN:37498		OMP:0007377	decreased resistance to an alkylating agent	Relative to: OMP_AN:27502 Genotype differences: +lacZ4787(del)( +pheS -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:methyl methanesulfonate (MMS)	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:25255) methyl methanesulfonate (MMS)	chemical concentration= 0.05% normalized fitness= -4.05
OMP_AN:37499		OMP:0007249	decreased resistance to a chemical	Relative to: OMP_AN:27574 Genotype differences: +lacZ4787(del)( +pheS -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Paraquat dichloride	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:28786) Paraquat dichloride	chemical concentration= 18 uM normalized fitness= -3.62
OMP_AN:37500		OMP:0007879	decreased resistance to an antimicrobial agent	Relative to: OMP_AN:27547 Genotype differences: +lacZ4787(del)( +pheS -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Hydrogen peroxide	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:16240) Hydrogen peroxide	chemical concentration= 2 mM normalized fitness= -4.05
OMP_AN:37501		OMP:0007879	decreased resistance to an antimicrobial agent	Relative to: OMP_AN:27546 Genotype differences: +lacZ4787(del)( +pheS -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Pyocyanin	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:8653) Pyocyanin	chemical concentration= 1 ug/ml normalized fitness= -6.67
OMP_AN:37502		OMP:0007879	decreased resistance to an antimicrobial agent	Relative to: OMP_AN:27565 Genotype differences: +lacZ4787(del)( +pheS -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Polymyxin B sulfate	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:8310) Polymyxin B sulfate	chemical concentration= 4 ug/ml normalized fitness= -4.31
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References

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