OMP ST:6299 ! Escherichia coli K-12 JMG1655

From OMPwiki

Strain Summary

Strain Name

Escherichia coli K-12 JMG1655

Synonyms
Taxon Information
  • Pangenome: Escherichia coli
  • Subspecies and/or strain: K-12
  • NCBI Taxonomy ID: 83333
Genotype

F- Lambda- rph-1 DE(srl-rec)306::Tn10

Strain Reference

PMID:17391508[1]

Strain availability
Ancestry

parent:OMP ST:159 ! Escherichia coli K-12 MG1655

Annotated phenotypes



Notes

Phenotype Annotation

Annotation ID not OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:1354

OMP:0007092

decreased cell motility by swarming

Relative to: OMP_AN:1353


Genotype differences:

+DE(srl-rec)306


Condition differences:

no differences

  • temperature:37C
  • medium:swarming motility medium
ECO:0005803

PMID:17391508[1]

OMP_AN:1396

NOT

OMP:0005323

altered cell motility by swarming

Relative to: OMP_AN:1353


Genotype differences:

+DE(srl-rec)306


Condition differences:

other:pCA24N-RecA-Htg?

  • temperature:37C
  • medium:swarming motility medium
  • other:pCA24N-RecA-Htg
ECO:0005803

motility assay evidence

PMID:17391508[1]

OMP_AN:1397

OMP:0007092

decreased cell motility by swarming

Relative to: OMP_AN:1353


Genotype differences:

+DE(srl-rec)306


Condition differences:

other:pCA24N?

  • other:pCA24N
  • temperature:37C
  • medium:swarming motility medium
ECO:0005803

motility assay evidence

PMID:17391508[1]

NCBI Taxonomy ID: pCA24N

This was a control annotation for OMP_AN:1396

OMP_AN:1398

OMP:0000111

presence of cell motility by swimming

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:swimming motility medium
  • ENVO:pCA24N-RecA-Htg
ECO:0005803

motility assay evidence

PMID:17391508[1]

OMP_AN:1399

NOT

OMP:0005324

altered cell motility by swimming

Relative to: OMP_AN:1398


Genotype differences:

no differences


Condition differences:

ENVO:pCA24NpCA24N-RecA-Htg

  • temperature:37C
  • medium:swimming motility medium
  • ENVO:pCA24N
ECO:0005803

motility assay evidence

PMID:17391508[1]

NCBI Taxonomy ID: pCA24N

This was a control annotation for OMP_AN:1398



Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. 1.0 1.1 1.2 1.3 1.4 1.5 Gómez-Gómez, JM et al. (2007) A novel role for RecA under non-stress: promotion of swarming motility in Escherichia coli K-12. BMC Biol. 5 14 PubMed OMPwiki page