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!|Annotation ID!!not!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
 
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Revision as of 16:39, 3 August 2015

Strain Summary

Strain Name

AW518

Synonyms
Taxon Information
  • Pangenome: Escherichia coli
  • Taxon: K-12
  • NCBI Taxon ID: 83333
Genotype other:Lambda- other:araC14 other:fhuA31 other:galK2(Oc) other:galT22 other:glnX44(AS) other:hisG4(Oc) other:lacY1 other:leuB6(Am) other:mgl-51 other:mtl-1 other:rfbC1 other:rpsL136(StrR) other:thiE1 other:thr-1 other:tsr-1 other:tsx-78 other:xylA5
Strain Reference

PMID:4884810[1]

Source
Ancestry

parent:AW405

Annotated phenotypes


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Notes

AW405 is a derivative of AW330. The his-4 allele was introduced from strain AT1372[2] by transduction with P1, followed by penicillin selection.[2]

Phenotype Annotation

Annotation ID not OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:47

OMP:0000005

presence of cell motility

Relative to:
Genotype differences:
Nothing to compare

Condition differences:
Nothing to compare
  • temperature:35C
  • medium:semi-solid tryptone agar
 ECO:0000181

in vitro assay evidence

PMID:4916925[3]

OMP_AN:48

OMP:0007041

decreased positive chemotaxis

Relative to:OMP_AN:45
Genotype differences:
+other:tsr-1

Condition differences:
no differences

  • temperature:35C
  • medium:semi-solid tryptone agar
 ECO:0000181

in vitro assay evidence

PMID:4916925[3]

OMP_AN:49

OMP:0007041

decreased positive chemotaxis

Relative to:OMP_AN:46
Genotype differences:
+other:tsr-1

Condition differences:
no differences

medium:buffer + serine (CHEBI:17115)

ECO:0000181

in vitro assay evidence

PMID:4916925[3]

OMP_AN:341

OMP:0007005

decreased negative chemotaxis

Relative to:
Genotype differences:
Nothing to compare

Condition differences:
Nothing to compare
  • temperature:30C
  • medium:acetate
  • medium:chemotaxis medium
 ECO:0000181

in vitro assay evidence

PMID:333433[4]

Temporal assay

OMP_AN:342

OMP:0007005

decreased negative chemotaxis

Relative to:
Genotype differences:
Nothing to compare

Condition differences:
Nothing to compare
  • temperature:30C
  • medium:benzoate
  • medium:chemotaxis medium
 ECO:0000181

in vitro assay evidence

PMID:333433[4]

Temporal assay

OMP_AN:343

OMP:0007005

decreased negative chemotaxis

Relative to:
Genotype differences:
Nothing to compare

Condition differences:
Nothing to compare
  • temperature:30C
  • medium:chemotaxis medium
  • medium:indole
 ECO:0000181

in vitro assay evidence

PMID:333433[4]

Temporal assay

OMP_AN:344

OMP:0007005

decreased negative chemotaxis

Relative to:
Genotype differences:
Nothing to compare

Condition differences:
Nothing to compare
  • temperature:30C
  • medium:chemotaxis medium
  • medium:leucine
 ECO:0000181

in vitro assay evidence

PMID:333433[4]

Temporal assay

OMP_AN:345

OMP:0007053

increased positive chemotaxis

Relative to:
Genotype differences:
Nothing to compare

Condition differences:
Nothing to compare
  • temperature:30C
  • medium:aspartate
  • medium:chemotaxis medium
 ECO:0000181

in vitro assay evidence

PMID:333433[4]

Temporal assay

OMP_AN:346

OMP:0007053

increased positive chemotaxis

Relative to:
Genotype differences:
Nothing to compare

Condition differences:
Nothing to compare
  • temperature:30C
  • medium:chemotaxis medium
  • medium:maltose
 ECO:0000181

in vitro assay evidence

PMID:333433[4]

Capillary assay

OMP_AN:347

OMP:0007053

increased positive chemotaxis

Relative to:
Genotype differences:
Nothing to compare

Condition differences:
Nothing to compare
  • temperature:30C
  • medium:chemotaxis medium
  • medium:galactose
 ECO:0000181

in vitro assay evidence

PMID:333433[4]

Capillary assay

OMP_AN:348

OMP:0007053

increased positive chemotaxis

Relative to:
Genotype differences:
Nothing to compare

Condition differences:
Nothing to compare
  • temperature:30C
  • medium:chemotaxis medium
  • medium:ribose
 ECO:0000181

in vitro assay evidence

PMID:333433[4]

Capillary assay

OMP_AN:349

OMP:0007054

increased negative chemotaxis

Relative to:
Genotype differences:
Nothing to compare

Condition differences:
Nothing to compare
  • temperature:30C
  • medium:Ni(II)
  • medium:chemotaxis medium
 ECO:0000181

in vitro assay evidence

PMID:333433[4]

Temporal assay

OMP_AN:350

OMP:0007054

increased negative chemotaxis

Relative to:
Genotype differences:
Nothing to compare

Condition differences:
Nothing to compare
  • temperature:30C
  • medium:Co(II)
  • medium:chemotaxis medium
 ECO:0000181

in vitro assay evidence

PMID:333433[4]

Temporal assay

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Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ Armstrong, JB & Adler, J (1969) Location of genes for motility and chemotaxis on the Escherichia coli genetic map. J. Bacteriol. 97 156-61 PubMed OMPwiki page
  2. ↑ Armstrong, JB & Adler, J (1967) Genetics of motility in Escherichia coli: complementation of paralysed mutants. Genetics 56 363-73 PubMed OMPwiki page
  3. ↑ 3.0 3.1 3.2 Hazelbauer, GL et al. (1969) Escherichia coli mutants defective in chemotaxis toward specific chemicals. Proc. Natl. Acad. Sci. U.S.A. 64 1300-7 PubMed OMPwiki page
  4. ↑ 4.0 4.1 4.2 4.3 4.4 4.5 4.6 4.7 4.8 4.9 Springer, MS et al. (1977) Sensory transduction in Escherichia coli: two complementary pathways of information processing that involve methylated proteins. Proc. Natl. Acad. Sci. U.S.A. 74 3312-6 PubMed OMPwiki page

Pages in category "Strain:Escherichia coli K-12 AW518"

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