Difference between revisions of "Category:Strain:Escherichia coli K-12 AB1884"

From OMPwiki
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*Pangenome: Escherichia coli
 
*Pangenome: Escherichia coli
*Taxon: K-12
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*Subspecies and/or strain: Taxon: K-12
*NCBI Taxon ID: [http://www.ncbi.nlm.nih.gov/taxonomy?term=83333 83333]
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*NCBI Taxonomy ID: NCBI Taxon ID: [http://www.ncbi.nlm.nih.gov/taxonomy?term=83333 83333]
 
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!align=left align='left' bgcolor='#CCCCFF' |Genotype
 
!align=left align='left' bgcolor='#CCCCFF' |Genotype
 
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*other:DE(gpt-proA)62
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DE(gpt-proA)62 F- Lambda- Rac-0 araC14 argE3(Oc) galK2(Oc) glnX44(AS) hisG4(Oc) kdgK51 lacY1 leuB6(Am) mgl-51 mtl-1 qsr'-0 rfbC1 rpoS396(Am) rpsL31(strR) thiE1 thr-1 tsx-33 uvrC34 xylA5
*other:F-
 
*other:Lambda-
 
*other:Rac-0
 
*other:araC14
 
*other:argE3(Oc)
 
*other:galK2(Oc)
 
*other:glnX44(AS)
 
*other:hisG4(Oc)
 
*other:kdgK51
 
*other:lacY1
 
*other:leuB6(Am)
 
*other:mgl-51
 
*other:mtl-1
 
*other:qsr'-0
 
*other:rfbC1
 
*other:rpoS396(Am)
 
*other:rpsL31(strR)
 
*other:thiE1
 
*other:thr-1
 
*other:tsx-33
 
*other:uvrC34
 
*other:xylA5
 
 
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!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
 
!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
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PMID:5335128
 
PMID:5335128
 
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!align=left align='left' bgcolor='#CCCCFF' |Source
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!align=left align='left' bgcolor='#CCCCFF' |Strain availability
 
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[http://cgsc.biology.yale.edu/StrainQuery.php CGSC# 1884]
 
[http://cgsc.biology.yale.edu/StrainQuery.php CGSC# 1884]
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<!-- OMP category tags -->[[Category:Strains that need OMP_ST accessions]]
 
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Revision as of 13:32, 8 August 2015

Strain Summary

Strain Name

AB1884

Synonyms
Taxon Information
  • Pangenome: Escherichia coli
  • Subspecies and/or strain: Taxon: K-12
  • NCBI Taxonomy ID: NCBI Taxon ID: 83333
Genotype

DE(gpt-proA)62 F- Lambda- Rac-0 araC14 argE3(Oc) galK2(Oc) glnX44(AS) hisG4(Oc) kdgK51 lacY1 leuB6(Am) mgl-51 mtl-1 qsr'-0 rfbC1 rpoS396(Am) rpsL31(strR) thiE1 thr-1 tsx-33 uvrC34 xylA5

Strain Reference

PMID:5335128[1]

Strain availability

CGSC# 1884

Ancestry

parent:AB1157

Annotated phenotypes


Notes

Phenotype Annotation

Annotation ID not OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:54

OMP:0007204

decreased resistance to UV-A radiation

Relative to:OMP_AN:52
Genotype differences:
+other:uvrC34

Condition differences:
no differences

  • other:8-MOP (0.1 microgram ml^-1)
  • other:UV-A
ECO:0001027

colony counting evidence

PMID:20004108[2]

Reference Figure 3

OMP_AN:55

NOT

OMP:0005125

altered UV radiation resistance

Relative to:OMP_AN:53
Genotype differences:
+other:uvrC34

Condition differences:
no differences

  • other:3-CPs (0.1 microgram ml^-1)
  • other:UV-A
ECO:0001027

colony counting evidence

PMID:20004108[2]

Reference Figure 2

OMP_AN:57

OMP:0007201

decreased resistance to UV-C radiation

Relative to:OMP_AN:56
Genotype differences:
+other:uvrC34

Condition differences:
no differences

other:UV-C

ECO:0001027

colony counting evidence

PMID:20004108[2]

Reference Figure 3



Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. Howard-Flanders, P et al. (1966) Three loci in Escherichia coli K-12 that control the excision of pyrimidine dimers and certain other mutagen products from DNA. Genetics 53 1119-36 PubMed OMPwiki page
  2. 2.0 2.1 2.2 Lage, C et al. (2010) Differential survival of Escherichia coli uvrA, uvrB, and uvrC mutants to psoralen plus UV-A (PUVA): Evidence for uncoupled action of nucleotide excision repair to process DNA adducts. J. Photochem. Photobiol. B, Biol. 98 40-7 PubMed OMPwiki page

Pages in category "Strain:Escherichia coli K-12 AB1884"

This category contains only the following page.