OMP ST:806 ! Escherichia coli K-12 W3110

From OMPwiki

Strain Summary

Strain Name

W3110

Synonyms
Taxon Information
  • Pangenome: Escherichia coli
  • Subspecies and/or strain: K-12
  • NCBI Taxonomy ID: 83333
Genotype

F- IN(rrnD-rrnE)1 Lambda- rph-1

Strain Reference

Coli Genetic Stock Center CGSC#:4474

Strain availability

Coli Genetic Stock Center CGSC#:4474

Ancestry
Annotated phenotypes


Notes

Phenotype Annotation

Showing 1 to 10 of 12 entries
Annotation IDnotOMP IDOMP term nameRelative phenotype informationExperimental conditionECO IDECO term nameReferenceAnnotation ExtensionNotes

OMP_AN:116

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:35C
  • medium:semisolid galactose agar
ECO:0000182

in vitro culture assay evidence

PMID:4916925[1]

CHEBI:12936

OMP_AN:237

OMP:0006024

heterotrophic

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:35C
  • medium:semisolid galactose agar
ECO:0000182

in vitro culture assay evidence

PMID:4916925[1]

CHEBI:12936

OMP_AN:510

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:chemotaxis medium
  • medium:serine (1 mM)
ECO:0005609

capillary assay evidence

PMID:366075[2]

CHEBI:17822 serine

OMP_AN:511

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:aspartic acid (3 mM)
  • medium:chemotaxis medium
ECO:0005609

capillary assay evidence

PMID:366075[2]

CHEBI:22660 aspartic acid

OMP_AN:512

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:chemotaxis medium
  • medium:galactose (0.1 mM)
ECO:0005609

capillary assay evidence

PMID:366075[2]

CHEBI:28260 galactose

OMP_AN:513

OMP:0007041

decreased positive chemotaxis

Relative to: OMP_AN:510


Genotype differences:

no differences


Condition differences:

medium:levorphanol (1.1 mM)?

  • temperature:37C
  • medium:chemotaxis medium
  • medium:levorphanol (1.1 mM)
  • medium:serine (1 mM)
ECO:0005609

capillary assay evidence

PMID:366075[2]

CHEBI:17822 serine CHEBI:6444 levorphanol

OMP_AN:514

OMP:0007041

decreased positive chemotaxis

Relative to: OMP_AN:511


Genotype differences:

no differences


Condition differences:

medium:levorphanol (1.3 mM)?

  • temperature:37C
  • medium:aspartic acid (3 mM)
  • medium:chemotaxis medium
  • medium:levorphanol (1.3 mM)
ECO:0005609

capillary assay evidence

PMID:366075[2]

CHEBI:22660 aspartic acid CHEBI:6444 levorphanol

OMP_AN:515

OMP:0007041

decreased positive chemotaxis

Relative to: OMP_AN:512


Genotype differences:

no differences


Condition differences:

medium:levorphanol (1.1 mM)?

  • temperature:37C
  • medium:chemotaxis medium
  • medium:galactose (0.1 mM)
  • medium:levorphanol (1.1 mM)
ECO:0005609

capillary assay evidence

PMID:366075[2]

CHEBI:28260 galactose CHEBI:6444 levorphanol

OMP_AN:536

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:aspartate (10 mM)
  • medium:semi-sold agar
ECO:0005609

capillary assay evidence

PMID:2674636[3]

CHEBI:17053 aspartate

OMP_AN:537

OMP:0007041

decreased positive chemotaxis

Relative to: OMP_AN:536


Genotype differences:

no differences


Condition differences:

medium:acetylcholine (10 mM)?

  • temperature:30C
  • medium:acetylcholine (10 mM)
  • medium:aspartate (10 mM)
  • medium:semi-sold agar
ECO:0005609

capillary assay evidence

PMID:2674636[3]

CHEBI:17053 aspartate CHEBI:15355 acetylcholine

Showing 1 to 10 of 12 entries



Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. Jump up to: 1.0 1.1 Hazelbauer, GL et al. (1969) Escherichia coli mutants defective in chemotaxis toward specific chemicals. Proc. Natl. Acad. Sci. U.S.A. 64 1300-7 PubMed OMPwiki page
  2. Jump up to: 2.0 2.1 2.2 2.3 2.4 2.5 Persky-Brosh, S et al. (1978) Effect of morphine analogues on chemotaxis in Escherichia coli. J. Gen. Microbiol. 107 53-8 PubMed OMPwiki page
  3. Jump up to: 3.0 3.1 Shinozawa, T & Fukunaga, S (1989) Acetylcholine inhibition of Escherichia coli chemotaxis for aspartate. Microbiol. Immunol. 33 689-92 PubMed OMPwiki page
  4. Jump up to: 4.0 4.1 Inoue, T et al. (2007) Genome-wide screening of genes required for swarming motility in Escherichia coli K-12. J. Bacteriol. 189 950-7 PubMed OMPwiki page