OMP ST:772 ! Escherichia coli K-12 AW405

Strain Summary

Strain Name	AW405
Synonyms
Taxon Information	Pangenome: Escherichia coli Subspecies and/or strain: Taxon: K-12 NCBI Taxonomy ID: 83333
Genotype	Lambda- araC14 fhuA31 galK2(Oc) galT22 glnX44(AS) hisG4(Oc) lacY1 leuB6(Am) mgl-51 mtl-1 rfbC1 rpsL136(StrR) thiE1 thr-1 tsx-78 xylA5
Strain Reference	other:Coli Genetics Stock Center AW405 PMID:4861166^[1]
Strain availability	Coli Genetics Stock Center AW405
Ancestry	parent:OMP ST:179 ! Escherichia coli K-12 AW330
Annotated phenotypes
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Notes

Phenotype Annotation

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Annotation ID	OMP ID	OMP term name	Relative phenotype information	Experimental condition	ECO ID	ECO term name	Reference	Annotation Extension
OMP_AN:102	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:chemotaxis medium medium:maltose	ECO:0005608	tumble frequency assay evidence	PMID:333433^[4]	CHEBI:17306 maltose
OMP_AN:105	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:aspartate medium:chemotaxis medium	ECO:0005608	tumble frequency assay evidence	PMID:333433^[4]	CHEBI:17053 aspartate
OMP_AN:400	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:AiBu medium:chemotaxis medium	ECO:0005608	tumble frequency assay evidence	PMID:333433^[4]
OMP_AN:401	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:chemotaxis medium medium:galactose	ECO:0005609	capillary assay evidence	PMID:333433^[4]	CHEBI:28260 galactose
OMP_AN:402	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:chemotaxis medium medium:ribose	ECO:0005609	capillary assay evidence	PMID:333433^[4]	CHEBI:33942 ribose
OMP_AN:403	OMP:0000053	presence of negative chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:acetate medium:chemotaxis medium	ECO:0005608	tumble frequency assay evidence	PMID:333433^[4]	CHEBI:30089 acetate
OMP_AN:404	OMP:0000053	presence of negative chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:benzoate medium:chemotaxis medium	ECO:0005608	tumble frequency assay evidence	PMID:333433^[4]	CHEBI:16150 benzoate
OMP_AN:405	OMP:0000053	presence of negative chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:chemotaxis medium medium:indole	ECO:0005608	tumble frequency assay evidence	PMID:333433^[4]	CHEBI:35581 indole
OMP_AN:406	OMP:0000053	presence of negative chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:chemotaxis medium medium:leucine	ECO:0005608	tumble frequency assay evidence	PMID:333433^[4]	CHEBI:15603 leucine
OMP_AN:407	OMP:0000053	presence of negative chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:Ni(II) medium:chemotaxis medium	ECO:0005608	tumble frequency assay evidence	PMID:333433^[4]

Showing 1 to 10 of 85 entries

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Additional Information

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References

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Jump up ↑ Armstrong, JB & Adler, J (1967) Genetics of motility in Escherichia coli: complementation of paralysed mutants. Genetics 56 363-73 PubMed OMPwiki page
↑ ^{Jump up to: 2.0} ^2.1 Armstrong, JB & Adler, J (1969) Location of genes for motility and chemotaxis on the Escherichia coli genetic map. J. Bacteriol. 97 156-61 PubMed OMPwiki page
↑ ^{Jump up to: 3.0} ^3.1 Hazelbauer, GL et al. (1969) Escherichia coli mutants defective in chemotaxis toward specific chemicals. Proc. Natl. Acad. Sci. U.S.A. 64 1300-7 PubMed OMPwiki page
↑ ^{Jump up to: 4.00} ^4.01 ^4.02 ^4.03 ^4.04 ^4.05 ^4.06 ^4.07 ^4.08 ^4.09 ^4.10 ^4.11 Springer, MS et al. (1977) Sensory transduction in Escherichia coli: two complementary pathways of information processing that involve methylated proteins. Proc. Natl. Acad. Sci. U.S.A. 74 3312-6 PubMed OMPwiki page
↑ ^{Jump up to: 5.0} ^5.1 ^5.2 ^5.3 ^5.4 ^5.5 ^5.6 ^5.7 ^5.8 Mesibov, R & Adler, J (1972) Chemotaxis toward amino acids in Escherichia coli. J. Bacteriol. 112 315-26 PubMed OMPwiki page
↑ ^{Jump up to: 6.0} ^6.1 ^6.2 ^6.3 ^6.4 ^6.5 Tisa, LS et al. (1993) Inhibition of Escherichia coli chemotaxis by omega-conotoxin, a calcium ion channel blocker. J. Bacteriol. 175 1235-8 PubMed OMPwiki page
↑ ^{Jump up to: 7.00} ^7.01 ^7.02 ^7.03 ^7.04 ^7.05 ^7.06 ^7.07 ^7.08 ^7.09 ^7.10 ^7.11 ^7.12 ^7.13 ^7.14 Lake, EM et al. (1995) Analogue of aspartate and glutamate active at synapses are attractants for Escherichia coli. Cell. Mol. Neurobiol. 15 283-8 PubMed OMPwiki page
Jump up ↑ Imae, Y et al. (1987) Phenol: a complex chemoeffector in bacterial chemotaxis. J. Bacteriol. 169 371-9 PubMed OMPwiki page
↑ ^{Jump up to: 9.00} ^9.01 ^9.02 ^9.03 ^9.04 ^9.05 ^9.06 ^9.07 ^9.08 ^9.09 ^9.10 ^9.11 ^9.12 ^9.13 ^9.14 ^9.15 ^9.16 ^9.17 ^9.18 ^9.19 Hedblom, ML & Adler, J (1983) Chemotactic response of Escherichia coli to chemically synthesized amino acids. J. Bacteriol. 155 1463-6 PubMed OMPwiki page
↑ ^{Jump up to: 10.00} ^10.01 ^10.02 ^10.03 ^10.04 ^10.05 ^10.06 ^10.07 ^10.08 ^10.09 ^10.10 ^10.11 ^10.12 Qi, YL & Adler, J (1989) Salt taxis in Escherichia coli bacteria and its lack in mutants. Proc. Natl. Acad. Sci. U.S.A. 86 8358-62 PubMed OMPwiki page
↑ ^{Jump up to: 11.0} ^11.1 Tisa, LS et al. (2000) Effects of organic antagonists of Ca(2+), Na(+), and K(+) on chemotaxis and motility of escherichia coli. J. Bacteriol. 182 4856-61 PubMed OMPwiki page
↑ ^{Jump up to: 12.0} ^12.1 Oosawa, K & Imae, Y (1983) Glycerol and ethylene glycol: members of a new class of repellents of Escherichia coli chemotaxis. J. Bacteriol. 154 104-12 PubMed OMPwiki page
↑ ^{Jump up to: 13.0} ^13.1 de Jonge, R et al. (1996) Pyrroloquinoline quinone, a chemotactic attractant for Escherichia coli. J. Bacteriol. 178 1224-6 PubMed OMPwiki page

[PMID:4861166-1] Jump up ↑ Armstrong, JB & Adler, J (1967) Genetics of motility in Escherichia coli: complementation of paralysed mutants. Genetics 56 363-73 PubMed OMPwiki page

[PMID:4884810-2] {Jump up to: 2.0} ^2.1 Armstrong, JB & Adler, J (1969) Location of genes for motility and chemotaxis on the Escherichia coli genetic map. J. Bacteriol. 97 156-61 PubMed OMPwiki page

[PMID:4916925-3] {Jump up to: 3.0} ^3.1 Hazelbauer, GL et al. (1969) Escherichia coli mutants defective in chemotaxis toward specific chemicals. Proc. Natl. Acad. Sci. U.S.A. 64 1300-7 PubMed OMPwiki page

[PMID:333433-4] {Jump up to: 4.00} ^4.01 ^4.02 ^4.03 ^4.04 ^4.05 ^4.06 ^4.07 ^4.08 ^4.09 ^4.10 ^4.11 Springer, MS et al. (1977) Sensory transduction in Escherichia coli: two complementary pathways of information processing that involve methylated proteins. Proc. Natl. Acad. Sci. U.S.A. 74 3312-6 PubMed OMPwiki page

[PMID:4562400-5] {Jump up to: 5.0} ^5.1 ^5.2 ^5.3 ^5.4 ^5.5 ^5.6 ^5.7 ^5.8 Mesibov, R & Adler, J (1972) Chemotaxis toward amino acids in Escherichia coli. J. Bacteriol. 112 315-26 PubMed OMPwiki page

[PMID:8444785-6] {Jump up to: 6.0} ^6.1 ^6.2 ^6.3 ^6.4 ^6.5 Tisa, LS et al. (1993) Inhibition of Escherichia coli chemotaxis by omega-conotoxin, a calcium ion channel blocker. J. Bacteriol. 175 1235-8 PubMed OMPwiki page

[PMID:8590457-7] {Jump up to: 7.00} ^7.01 ^7.02 ^7.03 ^7.04 ^7.05 ^7.06 ^7.07 ^7.08 ^7.09 ^7.10 ^7.11 ^7.12 ^7.13 ^7.14 Lake, EM et al. (1995) Analogue of aspartate and glutamate active at synapses are attractants for Escherichia coli. Cell. Mol. Neurobiol. 15 283-8 PubMed OMPwiki page

[PMID:3025180-8] Jump up ↑ Imae, Y et al. (1987) Phenol: a complex chemoeffector in bacterial chemotaxis. J. Bacteriol. 169 371-9 PubMed OMPwiki page

[PMID:6350273-9] {Jump up to: 9.00} ^9.01 ^9.02 ^9.03 ^9.04 ^9.05 ^9.06 ^9.07 ^9.08 ^9.09 ^9.10 ^9.11 ^9.12 ^9.13 ^9.14 ^9.15 ^9.16 ^9.17 ^9.18 ^9.19 Hedblom, ML & Adler, J (1983) Chemotactic response of Escherichia coli to chemically synthesized amino acids. J. Bacteriol. 155 1463-6 PubMed OMPwiki page

[PMID:2682648-10] {Jump up to: 10.00} ^10.01 ^10.02 ^10.03 ^10.04 ^10.05 ^10.06 ^10.07 ^10.08 ^10.09 ^10.10 ^10.11 ^10.12 Qi, YL & Adler, J (1989) Salt taxis in Escherichia coli bacteria and its lack in mutants. Proc. Natl. Acad. Sci. U.S.A. 86 8358-62 PubMed OMPwiki page

[PMID:10940028-11] {Jump up to: 11.0} ^11.1 Tisa, LS et al. (2000) Effects of organic antagonists of Ca(2+), Na(+), and K(+) on chemotaxis and motility of escherichia coli. J. Bacteriol. 182 4856-61 PubMed OMPwiki page

[PMID:6339465-12] {Jump up to: 12.0} ^12.1 Oosawa, K & Imae, Y (1983) Glycerol and ethylene glycol: members of a new class of repellents of Escherichia coli chemotaxis. J. Bacteriol. 154 104-12 PubMed OMPwiki page

[PMID:8576064-13] {Jump up to: 13.0} ^13.1 de Jonge, R et al. (1996) Pyrroloquinoline quinone, a chemotactic attractant for Escherichia coli. J. Bacteriol. 178 1224-6 PubMed OMPwiki page

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OMP ST:772 ! Escherichia coli K-12 AW405

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Strain Summary

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Phenotype Annotation

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References

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