OMP ST:8457 ! Escherichia coli K-12 JW2858

Strain Summary

Strain Name	Escherichia coli K-12 JW2858
Synonyms
Taxon Information	Pangenome: Escherichia coli Subspecies and/or strain: K-12 NCBI Taxonomy ID: 83333
Genotype	DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 lysS741(del)::FRT-kan-FRT
Strain Reference	PMID:19160513^[1]
Strain availability
Ancestry	parent:OMP ST:800 ! Escherichia coli K-12 BW25113
Annotated phenotypes
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Annotation ID	OMP ID	OMP term name	Relative phenotype information	Experimental condition	ECO ID	ECO term name	Reference	Annotation Extension	Notes
OMP_AN:32652	OMP:0006044	decreased resistance to beta-lactam	Relative to: OMP_AN:27530 Genotype differences: +lacZ4787(del)( +lysS741(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Amoxicillin	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072^[2]	towards some (CHEBI:2676) Amoxicillin	chemical concentration= 1 ug/ml normalized fitness= -3.52
OMP_AN:32653	OMP:0007075	decreased growth factor requirement	Relative to: OMP_AN:27600 Genotype differences: +lacZ4787(del)( +lysS741(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:MOPS medium:NH4Cl	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072^[2]	towards some (CHEBI:31206) NH4Cl	chemical concentration= 9.5mm normalized fitness= -3.95
OMP_AN:32654	OMP:0007032	decreased utilization of inorganic nitrogen source	Relative to: OMP_AN:27610 Genotype differences: +lacZ4787(del)( +lysS741(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:MOPS medium:NH4Cl	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072^[2]	towards some (CHEBI:31206) NH4Cl	chemical concentration= 9.5mm normalized fitness= -3.95
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See Help:References for how to manage references in OMPwiki.

↑ Typas, A et al. (2008) High-throughput, quantitative analyses of genetic interactions in E. coli. Nat. Methods 5 781-7 PubMed OMPwiki page
↑ ^2.0 ^2.1 ^2.2 Nichols, RJ et al. (2011) Phenotypic landscape of a bacterial cell. Cell 144 143-56 PubMed OMPwiki page