Difference between revisions of "Category:Strain:Escherichia coli K-12 AW518"

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*Pangenome: Escherichia coli
 
*Pangenome: Escherichia coli
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*Taxon: K-12
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*Subspecies and/or strain: Taxon: K-12
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*NCBI Taxon ID: [http://www.ncbi.nlm.nih.gov/taxonomy?term=83333 83333]
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*NCBI Taxonomy ID: NCBI Taxon ID: [http://www.ncbi.nlm.nih.gov/taxonomy?term=83333 83333]
 
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!align=left align='left' bgcolor='#CCCCFF' |Genotype
 
!align=left align='left' bgcolor='#CCCCFF' |Genotype
 
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*other:Lambda-
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Lambda- araC14 fhuA31 galK2(Oc) galT22 glnX44(AS) hisG4(Oc) lacY1 leuB6(Am) mgl-51 mtl-1 rfbC1 rpsL136(StrR) thiE1 thr-1 tsr-1 tsx-78 xylA5
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*other:araC14
 
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*other:fhuA31
 
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*other:galK2(Oc)
 
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*other:galT22
 
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*other:glnX44(AS)
 
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*other:hisG4(Oc)
 
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*other:lacY1
 
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*other:leuB6(Am)
 
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*other:mgl-51
 
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*other:mtl-1
 
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*other:rfbC1
 
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*other:rpsL136(StrR)
 
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*other:thiE1
 
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*other:thr-1
 
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*other:tsr-1
 
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*other:tsx-78
 
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*other:xylA5
 
 
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!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
 
!align=left align='left' bgcolor='#CCCCFF' |Strain Reference

Revision as of 11:08, 20 August 2015

Strain Summary

Strain Name

AW518

Synonyms
Taxon Information
  • Pangenome: Escherichia coli
  • Subspecies and/or strain: Taxon: K-12
  • NCBI Taxonomy ID: NCBI Taxon ID: 83333
Genotype

Lambda- araC14 fhuA31 galK2(Oc) galT22 glnX44(AS) hisG4(Oc) lacY1 leuB6(Am) mgl-51 mtl-1 rfbC1 rpsL136(StrR) thiE1 thr-1 tsr-1 tsx-78 xylA5

Strain Reference

PMID:4884810[1]

Strain availability
Ancestry

parent:AW405

Annotated phenotypes


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Notes

AW405 is a derivative of AW330. The his-4 allele was introduced from strain AT1372[2] by transduction with P1, followed by penicillin selection.[2]

Phenotype Annotation

Annotation ID not OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:47

OMP:0000005

presence of cell motility

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:35C
  • medium:semi-solid tryptone agar
 ECO:0000181

in vitro assay evidence

PMID:4916925[3]

OMP_AN:48

OMP:0007041

decreased positive chemotaxis

Relative to: OMP_AN:45

Genotype differences:

+other:Lambda- +other:araC14 +other:fhuA31 +other:galK2(Oc) +other:galT22 +other:glnX44(AS) +other:hisG4(Oc) +other:lacY1 +other:leuB6(Am) +other:mgl-51 +other:mtl-1 +other:rfbC1 +other:rpsL136(StrR) +other:thiE1 +other:thr-1 +other:tsr-1 +other:tsx-78 +other:xylA5 -Lambda- -araC14 -fhuA31 -galK2(Oc) -galT22 -glnX44(AS) -hisG4(Oc) -lacY1 -leuB6(Am) -mgl-51 -mtl-1 -rfbC1 -rpsL136(StrR) -thiE1 -thr-1 -tsx-78 -xylA5

Condition differences:

no differences

  • temperature:35C
  • medium:semi-solid tryptone agar
 ECO:0000181

in vitro assay evidence

PMID:4916925[3]

OMP_AN:49

OMP:0007041

decreased positive chemotaxis

Relative to: OMP_AN:46

Genotype differences:

+other:Lambda- +other:araC14 +other:fhuA31 +other:galK2(Oc) +other:galT22 +other:glnX44(AS) +other:hisG4(Oc) +other:lacY1 +other:leuB6(Am) +other:mgl-51 +other:mtl-1 +other:rfbC1 +other:rpsL136(StrR) +other:thiE1 +other:thr-1 +other:tsr-1 +other:tsx-78 +other:xylA5 -Lambda- -araC14 -fhuA31 -galK2(Oc) -galT22 -glnX44(AS) -hisG4(Oc) -lacY1 -leuB6(Am) -mgl-51 -mtl-1 -rfbC1 -rpsL136(StrR) -thiE1 -thr-1 -tsx-78 -xylA5

Condition differences:

medium:buffer + serine (CHEBIbuffer;serine (CHEBI

medium:buffer + serine (CHEBI:17115)

ECO:0000181

in vitro assay evidence

PMID:4916925[3]

OMP_AN:341

OMP:0007005

decreased negative chemotaxis

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:30C
  • medium:acetate
  • medium:chemotaxis medium
 ECO:0000181

in vitro assay evidence

PMID:333433[4]

Temporal assay

OMP_AN:342

OMP:0007005

decreased negative chemotaxis

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:30C
  • medium:benzoate
  • medium:chemotaxis medium
 ECO:0000181

in vitro assay evidence

PMID:333433[4]

Temporal assay

OMP_AN:343

OMP:0007005

decreased negative chemotaxis

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:30C
  • medium:chemotaxis medium
  • medium:indole
 ECO:0000181

in vitro assay evidence

PMID:333433[4]

Temporal assay

OMP_AN:344

OMP:0007005

decreased negative chemotaxis

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:30C
  • medium:chemotaxis medium
  • medium:leucine
 ECO:0000181

in vitro assay evidence

PMID:333433[4]

Temporal assay

OMP_AN:345

OMP:0007053

increased positive chemotaxis

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:30C
  • medium:aspartate
  • medium:chemotaxis medium
 ECO:0000181

in vitro assay evidence

PMID:333433[4]

Temporal assay

OMP_AN:346

OMP:0007053

increased positive chemotaxis

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:30C
  • medium:chemotaxis medium
  • medium:maltose
 ECO:0000181

in vitro assay evidence

PMID:333433[4]

Capillary assay

OMP_AN:347

OMP:0007053

increased positive chemotaxis

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:30C
  • medium:chemotaxis medium
  • medium:galactose
 ECO:0000181

in vitro assay evidence

PMID:333433[4]

Capillary assay

OMP_AN:348

OMP:0007053

increased positive chemotaxis

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:30C
  • medium:chemotaxis medium
  • medium:ribose
 ECO:0000181

in vitro assay evidence

PMID:333433[4]

Capillary assay

OMP_AN:349

OMP:0007054

increased negative chemotaxis

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:30C
  • medium:Ni(II)
  • medium:chemotaxis medium
 ECO:0000181

in vitro assay evidence

PMID:333433[4]

Temporal assay

OMP_AN:350

OMP:0007054

increased negative chemotaxis

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:30C
  • medium:Co(II)
  • medium:chemotaxis medium
 ECO:0000181

in vitro assay evidence

PMID:333433[4]

Temporal assay

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Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ Armstrong, JB & Adler, J (1969) Location of genes for motility and chemotaxis on the Escherichia coli genetic map. J. Bacteriol. 97 156-61 PubMed OMPwiki page
  2. ↑ Armstrong, JB & Adler, J (1967) Genetics of motility in Escherichia coli: complementation of paralysed mutants. Genetics 56 363-73 PubMed OMPwiki page
  3. ↑ 3.0 3.1 3.2 Hazelbauer, GL et al. (1969) Escherichia coli mutants defective in chemotaxis toward specific chemicals. Proc. Natl. Acad. Sci. U.S.A. 64 1300-7 PubMed OMPwiki page
  4. ↑ 4.0 4.1 4.2 4.3 4.4 4.5 4.6 4.7 4.8 4.9 Springer, MS et al. (1977) Sensory transduction in Escherichia coli: two complementary pathways of information processing that involve methylated proteins. Proc. Natl. Acad. Sci. U.S.A. 74 3312-6 PubMed OMPwiki page

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