Difference between revisions of "Category:Strain:Escherichia coli K-12 AB1884"

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!|Annotation ID!!not!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
 
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decreased resistance to UV-A radiation
 
decreased resistance to UV-A radiation
 
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Genotype differences:<br>
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+other:uvrC34 <br/><br>
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+DE(gpt-proA)62 +F- +Lambda- +Rac-0 +araC14 +argE3(Oc) +galK2(Oc) +glnX44(AS) +hisG4(Oc) +kdgK51 +lacY1 +leuB6(Am) +mgl-51 +mtl-1 +qsr'-0 +rfbC1 +rpoS396(Am) +rpsL31(strR) +thiE1 +thr-1 +tsx-33 +uvrC34 +xylA5  -other:DE(gpt-proA)62-other:F--other:Lambda--other:Rac-0-other:araC14-other:argE3(Oc)-other:galK2(Oc)-other:glnX44(AS)-other:hisG4(Oc)-other:kdgK51-other:lacY1-other:leuB6(Am)-other:mgl-51-other:mtl-1-other:qsr'-0-other:rfbC1-other:rpoS396(Am)-other:rpsL31(strR)-other:thiE1-other:thr-1-other:tsx-33-other:xylA5
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altered UV radiation resistance
 
altered UV radiation resistance
 
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Genotype differences:<br>
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<hr>Genotype differences:<br>
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+other:uvrC34 <br/><br>
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+DE(gpt-proA)62 +F- +Lambda- +Rac-0 +araC14 +argE3(Oc) +galK2(Oc) +glnX44(AS) +hisG4(Oc) +kdgK51 +lacY1 +leuB6(Am) +mgl-51 +mtl-1 +qsr'-0 +rfbC1 +rpoS396(Am) +rpsL31(strR) +thiE1 +thr-1 +tsx-33 +uvrC34 +xylA5  -other:DE(gpt-proA)62-other:F--other:Lambda--other:Rac-0-other:araC14-other:argE3(Oc)-other:galK2(Oc)-other:glnX44(AS)-other:hisG4(Oc)-other:kdgK51-other:lacY1-other:leuB6(Am)-other:mgl-51-other:mtl-1-other:qsr'-0-other:rfbC1-other:rpoS396(Am)-other:rpsL31(strR)-other:thiE1-other:thr-1-other:tsx-33-other:xylA5
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decreased resistance to UV-C radiation
 
decreased resistance to UV-C radiation
 
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+other:uvrC34 <br/><br>
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+DE(gpt-proA)62 +F- +Lambda- +Rac-0 +araC14 +argE3(Oc) +galK2(Oc) +glnX44(AS) +hisG4(Oc) +kdgK51 +lacY1 +leuB6(Am) +mgl-51 +mtl-1 +qsr'-0 +rfbC1 +rpoS396(Am) +rpsL31(strR) +thiE1 +thr-1 +tsx-33 +uvrC34 +xylA5  -other:DE(gpt-proA)62-other:F--other:Lambda--other:Rac-0-other:araC14-other:argE3(Oc)-other:galK2(Oc)-other:glnX44(AS)-other:hisG4(Oc)-other:kdgK51-other:lacY1-other:leuB6(Am)-other:mgl-51-other:mtl-1-other:qsr'-0-other:rfbC1-other:rpoS396(Am)-other:rpsL31(strR)-other:thiE1-other:thr-1-other:tsx-33-other:xylA5
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Revision as of 18:24, 17 August 2015

Strain Summary

Strain Name

AB1884

Synonyms
Taxon Information
  • Pangenome: Escherichia coli
  • Subspecies and/or strain: Taxon: K-12
  • NCBI Taxonomy ID: NCBI Taxon ID: 83333
Genotype

DE(gpt-proA)62 F- Lambda- Rac-0 araC14 argE3(Oc) galK2(Oc) glnX44(AS) hisG4(Oc) kdgK51 lacY1 leuB6(Am) mgl-51 mtl-1 qsr'-0 rfbC1 rpoS396(Am) rpsL31(strR) thiE1 thr-1 tsx-33 uvrC34 xylA5

Strain Reference

PMID:5335128[1]

Strain availability

CGSC# 1884

Ancestry

parent:AB1157

Annotated phenotypes


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Notes

Phenotype Annotation

Annotation ID not OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:54

OMP:0007204

decreased resistance to UV-A radiation

Relative to: OMP_AN:52

Genotype differences:

+DE(gpt-proA)62 +F- +Lambda- +Rac-0 +araC14 +argE3(Oc) +galK2(Oc) +glnX44(AS) +hisG4(Oc) +kdgK51 +lacY1 +leuB6(Am) +mgl-51 +mtl-1 +qsr'-0 +rfbC1 +rpoS396(Am) +rpsL31(strR) +thiE1 +thr-1 +tsx-33 +uvrC34 +xylA5 -other:DE(gpt-proA)62-other:F--other:Lambda--other:Rac-0-other:araC14-other:argE3(Oc)-other:galK2(Oc)-other:glnX44(AS)-other:hisG4(Oc)-other:kdgK51-other:lacY1-other:leuB6(Am)-other:mgl-51-other:mtl-1-other:qsr'-0-other:rfbC1-other:rpoS396(Am)-other:rpsL31(strR)-other:thiE1-other:thr-1-other:tsx-33-other:xylA5

Condition differences:

no differences

  • other:8-MOP (0.1 microgram ml^-1)
  • other:UV-A
 ECO:0001027

colony counting evidence

PMID:20004108[2]

Reference Figure 3

OMP_AN:55

NOT

OMP:0005125

altered UV radiation resistance

Relative to: OMP_AN:53

Genotype differences:

+DE(gpt-proA)62 +F- +Lambda- +Rac-0 +araC14 +argE3(Oc) +galK2(Oc) +glnX44(AS) +hisG4(Oc) +kdgK51 +lacY1 +leuB6(Am) +mgl-51 +mtl-1 +qsr'-0 +rfbC1 +rpoS396(Am) +rpsL31(strR) +thiE1 +thr-1 +tsx-33 +uvrC34 +xylA5 -other:DE(gpt-proA)62-other:F--other:Lambda--other:Rac-0-other:araC14-other:argE3(Oc)-other:galK2(Oc)-other:glnX44(AS)-other:hisG4(Oc)-other:kdgK51-other:lacY1-other:leuB6(Am)-other:mgl-51-other:mtl-1-other:qsr'-0-other:rfbC1-other:rpoS396(Am)-other:rpsL31(strR)-other:thiE1-other:thr-1-other:tsx-33-other:xylA5

Condition differences:

no differences

  • other:3-CPs (0.1 microgram ml^-1)
  • other:UV-A
 ECO:0001027

colony counting evidence

PMID:20004108[2]

Reference Figure 2

OMP_AN:57

OMP:0007201

decreased resistance to UV-C radiation

Relative to: OMP_AN:56

Genotype differences:

+DE(gpt-proA)62 +F- +Lambda- +Rac-0 +araC14 +argE3(Oc) +galK2(Oc) +glnX44(AS) +hisG4(Oc) +kdgK51 +lacY1 +leuB6(Am) +mgl-51 +mtl-1 +qsr'-0 +rfbC1 +rpoS396(Am) +rpsL31(strR) +thiE1 +thr-1 +tsx-33 +uvrC34 +xylA5 -other:DE(gpt-proA)62-other:F--other:Lambda--other:Rac-0-other:araC14-other:argE3(Oc)-other:galK2(Oc)-other:glnX44(AS)-other:hisG4(Oc)-other:kdgK51-other:lacY1-other:leuB6(Am)-other:mgl-51-other:mtl-1-other:qsr'-0-other:rfbC1-other:rpoS396(Am)-other:rpsL31(strR)-other:thiE1-other:thr-1-other:tsx-33-other:xylA5

Condition differences:

no differences

other:UV-C

ECO:0001027

colony counting evidence

PMID:20004108[2]

Reference Figure 3

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Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ Howard-Flanders, P et al. (1966) Three loci in Escherichia coli K-12 that control the excision of pyrimidine dimers and certain other mutagen products from DNA. Genetics 53 1119-36 PubMed OMPwiki page
  2. ↑ 2.0 2.1 2.2 Lage, C et al. (2010) Differential survival of Escherichia coli uvrA, uvrB, and uvrC mutants to psoralen plus UV-A (PUVA): Evidence for uncoupled action of nucleotide excision repair to process DNA adducts. J. Photochem. Photobiol. B, Biol. 98 40-7 PubMed OMPwiki page

Pages in category "Strain:Escherichia coli K-12 AB1884"

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