Difference between revisions of "OMP ST:815 ! Escherichia coli K-12 A592"

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!|Annotation ID!!not!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
 
!|Annotation ID!!not!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
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decreased sensitivity to colicin
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OMP:0006049
 
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increased resistance to bacteriocin
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Relative to: OMP_AN:155
  
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<hr>Genotype differences:<br>
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Relative to:OMP_AN:133
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+tolA1
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<br>
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<hr>Condition differences:<br>
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Genotype differences:<br>
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no differences
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+other:e14- +other:fhuA21 +other:glnX44(AS) +other:glpR200(glp^c) +other:lacY1 +other:leuB6(Am) +other:thr-1 +other:tolA1 -other:DE(gpt-lac)5-other:F'lac+pro+-other:ara-600-other:relA1-other:spoT1<br/><br>
 
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Condition differences:<br>
 
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medium:? vs  TB or LB agar<br/>
 
 
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*other:purified colicin E1
 
*other:purified colicin E1
 
*temperature:37C
 
*temperature:37C
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*medium:LB agar
 
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ECO:0000182
 
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in vitro culture assay evidence
 
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PMID:3001021
 
PMID:3001021
 
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[http://www.uniprot.org/uniprot/P02978 UniProtKB:P02978 Colicin E1]
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UniProtKB:P02978 Colicin E1
 
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decreased sensitivity to colicin
+
OMP:0006049
 
|
 
|
 +
increased resistance to bacteriocin
 +
|
 +
Relative to: OMP_AN:156
  
 +
<hr>Genotype differences:<br>
 +
+tolA1
 +
<hr>Condition differences:<br>
 +
temperature:37C42C
 
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|
−
Relative to:OMP_AN:134
+
*other:colicin E2
−
<br>
 
−
Genotype differences:<br>
 
−
+other:e14- +other:fhuA21 +other:glnX44(AS) +other:glpR200(glp^c) +other:lacY1 +other:leuB6(Am) +other:thr-1 +other:tolA1 -other:DE(gpt-lac)5-other:F'lac+pro+-other:ara-600-other:relA1-other:spoT1<br/><br>
 
−
Condition differences:<br>
 
−
medium:? vs  TB or LB agar<br/>
 
−
|
 
−
*other:purified colicin E2
 
 
*temperature:37C
 
*temperature:37C
 +
*medium:LB agar
 
|
 
|
−
 
+
ECO:0000182
 
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|
−
 
+
in vitro culture assay evidence
 
|
 
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PMID:3001021
 
PMID:3001021
 
|
 
|
−
[http://www.uniprot.org/uniprot/P04419 UniProtKB:P04419 Colicin E2]
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UniProtKB:P04419 Colicin E2
 
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Revision as of 18:30, 11 August 2015

Strain Summary

Strain Name

A592

Synonyms
Taxon Information
  • Pangenome: Escherichia coli
  • Subspecies and/or strain: K-12
  • NCBI Taxonomy ID: 83333
Genotype

F- Lambda- thr-1 leuB6(Am) fhuA21 cyn-101 lacY1 glnX44(AS) rfbC1 glpR200(glp^c) thiE1 tolA1

Strain Reference
Strain availability

CGSC

Ancestry

parent:Strain:Escherichia coli K-12 C600

Annotated phenotypes


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Notes

Some isolates of C600 have been reported to have lost the e14 element and therefore are mcrA-. The parent of A592 is reported is e14+. CGSC

Phenotype Annotation

Annotation ID not OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:157

OMP:0006049

increased resistance to bacteriocin

Relative to: OMP_AN:155

Genotype differences:

+tolA1

Condition differences:

no differences

  • other:purified colicin E1
  • temperature:37C
  • medium:LB agar
 ECO:0000182

in vitro culture assay evidence

PMID:3001021[1]

UniProtKB:P02978 Colicin E1

OMP_AN:158

OMP:0006049

increased resistance to bacteriocin

Relative to: OMP_AN:156

Genotype differences:

+tolA1

Condition differences:

temperature:37C42C

  • other:colicin E2
  • temperature:37C
  • medium:LB agar
 ECO:0000182

in vitro culture assay evidence

PMID:3001021[1]

UniProtKB:P04419 Colicin E2


edit table



Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ 1.0 1.1 1.2 Sun, TP & Webster, RE (1986) fii, a bacterial locus required for filamentous phage infection and its relation to colicin-tolerant tolA and tolB. J. Bacteriol. 165 107-15 PubMed OMPwiki page
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