Difference between revisions of "Category:Strain:Escherichia coli K-12 AW518"
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CHEBI:48828 Co(II) | CHEBI:48828 Co(II) | ||
| + | | | ||
| + | Temporal assay | ||
| + | |- | ||
| + | | | ||
| + | OMP_AN:422 | ||
| + | | | ||
| + | |||
| + | | | ||
| + | OMP:0007041 | ||
| + | | | ||
| + | decreased positive chemotaxis | ||
| + | | | ||
| + | Relative to: OMP_AN:421 | ||
| + | |||
| + | <hr>Genotype differences:<br> | ||
| + | +tsr-1 | ||
| + | <hr>Condition differences:<br> | ||
| + | no differences | ||
| + | | | ||
| + | *temperature:30C | ||
| + | *medium:chemotaxis medium | ||
| + | *medium:serine | ||
| + | | | ||
| + | ECO:0000181 | ||
| + | | | ||
| + | in vitro assay evidence | ||
| + | | | ||
| + | PMID:333433 | ||
| + | | | ||
| + | CHEBI:17115 serine | ||
| | | | ||
Temporal assay | Temporal assay | ||
Revision as of 10:44, 21 August 2015
Contents
Strain Summary
| Strain Name |
AW518 |
|---|---|
| Synonyms | |
| Taxon Information |
|
| Genotype |
Lambda- araC14 fhuA31 galK2(Oc) galT22 glnX44(AS) hisG4(Oc) lacY1 leuB6(Am) mgl-51 mtl-1 rfbC1 rpsL136(StrR) thiE1 thr-1 tsr-1 tsx-78 xylA5 |
| Strain Reference | |
| Strain availability | |
| Ancestry |
parent:AW405 |
| Annotated phenotypes |
|
Notes
AW405 is a derivative of AW330. The his-4 allele was introduced from strain AT1372[2] by transduction with P1, followed by penicillin selection.[2]
Phenotype Annotation
| Annotation ID | not | OMP ID | OMP term name | Relative phenotype information | Experimental condition | ECO ID | ECO term name | Reference | Annotation Extension | Notes |
|---|---|---|---|---|---|---|---|---|---|---|
|
OMP_AN:47 |
OMP:0000005 |
presence of cell motility |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000181 |
in vitro assay evidence |
||||
|
OMP_AN:48 |
OMP:0007041 |
decreased positive chemotaxis |
Relative to: OMP_AN:45 Genotype differences: +tsr-1 Condition differences: no differences |
|
ECO:0000181 |
in vitro assay evidence |
||||
|
OMP_AN:49 |
OMP:0007041 |
decreased positive chemotaxis |
Relative to: OMP_AN:46 Genotype differences: +tsr-1 Condition differences: medium:buffer + serine (CHEBIbuffer;serine (CHEBI |
medium:buffer + serine (CHEBI:17115) |
ECO:0000181 |
in vitro assay evidence |
||||
|
OMP_AN:341 |
OMP:0007005 |
decreased negative chemotaxis |
Relative to: OMP_AN:403 Genotype differences: +tsr-1 Condition differences: no differences |
|
ECO:0000181 |
in vitro assay evidence |
CHEBI:30089 acetate |
Temporal assay | ||
|
OMP_AN:342 |
OMP:0007005 |
decreased negative chemotaxis |
Relative to: OMP_AN:404 Genotype differences: +tsr-1 Condition differences: no differences |
|
ECO:0000181 |
in vitro assay evidence |
CHEBI:16150 benzoate |
Temporal assay | ||
|
OMP_AN:343 |
OMP:0007005 |
decreased negative chemotaxis |
Relative to: OMP_AN:405 Genotype differences: +tsr-1 Condition differences: no differences |
|
ECO:0000181 |
in vitro assay evidence |
CHEBI:35581 indole |
Temporal assay | ||
|
OMP_AN:344 |
OMP:0007005 |
decreased negative chemotaxis |
Relative to: OMP_AN:406 Genotype differences: +tsr-1 Condition differences: no differences |
|
ECO:0000181 |
in vitro assay evidence |
CHEBI:15603 leucine |
Temporal assay | ||
|
OMP_AN:345 |
OMP:0007053 |
increased positive chemotaxis |
Relative to: OMP_AN:105 Genotype differences: +tsr-1 Condition differences: no differences |
|
ECO:0000181 |
in vitro assay evidence |
Temporal assay | |||
|
OMP_AN:346 |
OMP:0007053 |
increased positive chemotaxis |
Relative to: OMP_AN:102 Genotype differences: +tsr-1 Condition differences: no differences |
|
ECO:0000181 |
in vitro assay evidence |
CHEBI:17306 maltose |
Temporal assay | ||
|
OMP_AN:347 |
OMP:0007053 |
increased positive chemotaxis |
Relative to: OMP_AN:401 Genotype differences: +tsr-1 Condition differences: no differences |
|
ECO:0000181 |
in vitro assay evidence |
CHEBI:28260 galactose |
Capillary assay | ||
|
OMP_AN:348 |
OMP:0007053 |
increased positive chemotaxis |
Relative to: OMP_AN:402 Genotype differences: +tsr-1 Condition differences: no differences |
|
ECO:0000181 |
in vitro assay evidence |
CHEBI:33942 ribose |
Capillary assay | ||
|
OMP_AN:349 |
OMP:0007054 |
increased negative chemotaxis |
Relative to: OMP_AN:407 Genotype differences: +tsr-1 Condition differences: no differences |
|
ECO:0000181 |
in vitro assay evidence |
Temporal assay | |||
|
OMP_AN:350 |
OMP:0007054 |
increased negative chemotaxis |
Relative to: OMP_AN:408 Genotype differences: +tsr-1 Condition differences: no differences |
|
ECO:0000181 |
in vitro assay evidence |
CHEBI:48828 Co(II) |
Temporal assay | ||
|
OMP_AN:422 |
OMP:0007041 |
decreased positive chemotaxis |
Relative to: OMP_AN:421 Genotype differences: +tsr-1 Condition differences: no differences |
|
ECO:0000181 |
in vitro assay evidence |
CHEBI:17115 serine |
Temporal assay | ||
Additional Information
Links
References
See Help:References for how to manage references in OMPwiki.
- ↑ Armstrong, JB & Adler, J (1969) Location of genes for motility and chemotaxis on the Escherichia coli genetic map. J. Bacteriol. 97 156-61 PubMed OMPwiki page
- ↑ Armstrong, JB & Adler, J (1967) Genetics of motility in Escherichia coli: complementation of paralysed mutants. Genetics 56 363-73 PubMed OMPwiki page
- ↑ 3.0 3.1 3.2 Hazelbauer, GL et al. (1969) Escherichia coli mutants defective in chemotaxis toward specific chemicals. Proc. Natl. Acad. Sci. U.S.A. 64 1300-7 PubMed OMPwiki page
- ↑ 4.00 4.01 4.02 4.03 4.04 4.05 4.06 4.07 4.08 4.09 4.10 Springer, MS et al. (1977) Sensory transduction in Escherichia coli: two complementary pathways of information processing that involve methylated proteins. Proc. Natl. Acad. Sci. U.S.A. 74 3312-6 PubMed OMPwiki page
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