Difference between revisions of "Category:Strain:Escherichia coli K-12 AW518"

From OMPwiki
(Table edited by Kcunningham via TableEdit)
(Table edited by Kcunningham via TableEdit)
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decreased negative chemotaxis
 
decreased negative chemotaxis
 
|
 
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−
Relative to:  
+
Relative to: OMP_AN:403
  
 
<hr>Genotype differences:<br>
 
<hr>Genotype differences:<br>
−
Nothing to compare<br/>
+
+tsr-1
 
<hr>Condition differences:<br>
 
<hr>Condition differences:<br>
−
Nothing to compare<br/>
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no differences
 
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*temperature:30C
 
*temperature:30C
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decreased negative chemotaxis
 
decreased negative chemotaxis
 
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−
Relative to:  
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Relative to: OMP_AN:404
  
 
<hr>Genotype differences:<br>
 
<hr>Genotype differences:<br>
−
Nothing to compare<br/>
+
+tsr-1
 
<hr>Condition differences:<br>
 
<hr>Condition differences:<br>
−
Nothing to compare<br/>
+
no differences
 
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*temperature:30C
 
*temperature:30C
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decreased negative chemotaxis
 
decreased negative chemotaxis
 
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−
Relative to:  
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Relative to: OMP_AN:405
  
 
<hr>Genotype differences:<br>
 
<hr>Genotype differences:<br>
−
Nothing to compare<br/>
+
+tsr-1
 
<hr>Condition differences:<br>
 
<hr>Condition differences:<br>
−
Nothing to compare<br/>
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no differences
 
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*temperature:30C
 
*temperature:30C
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decreased negative chemotaxis
 
decreased negative chemotaxis
 
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−
Relative to:  
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Relative to: OMP_AN:406
  
 
<hr>Genotype differences:<br>
 
<hr>Genotype differences:<br>
−
Nothing to compare<br/>
+
+tsr-1
 
<hr>Condition differences:<br>
 
<hr>Condition differences:<br>
−
Nothing to compare<br/>
+
no differences
 
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*temperature:30C
 
*temperature:30C
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increased positive chemotaxis
 
increased positive chemotaxis
 
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Relative to:  
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Relative to: OMP_AN:105
  
 
<hr>Genotype differences:<br>
 
<hr>Genotype differences:<br>
−
Nothing to compare<br/>
+
+tsr-1
 
<hr>Condition differences:<br>
 
<hr>Condition differences:<br>
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Nothing to compare<br/>
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no differences
 
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*temperature:30C
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increased positive chemotaxis
 
increased positive chemotaxis
 
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Relative to: OMP_AN:102
  
 
<hr>Genotype differences:<br>
 
<hr>Genotype differences:<br>
−
Nothing to compare<br/>
+
+tsr-1
 
<hr>Condition differences:<br>
 
<hr>Condition differences:<br>
−
Nothing to compare<br/>
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no differences
 
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*temperature:30C
 
*temperature:30C
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increased positive chemotaxis
 
increased positive chemotaxis
 
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<hr>Genotype differences:<br>
 
<hr>Genotype differences:<br>
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Nothing to compare<br/>
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+tsr-1
 
<hr>Condition differences:<br>
 
<hr>Condition differences:<br>
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no differences
 
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increased positive chemotaxis
 
increased positive chemotaxis
 
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<hr>Genotype differences:<br>
 
<hr>Genotype differences:<br>
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<hr>Condition differences:<br>
 
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increased negative chemotaxis
 
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<hr>Genotype differences:<br>
 
<hr>Genotype differences:<br>
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+tsr-1
 
<hr>Condition differences:<br>
 
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increased negative chemotaxis
 
increased negative chemotaxis
 
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<hr>Genotype differences:<br>
 
<hr>Genotype differences:<br>
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<hr>Condition differences:<br>
 
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no differences
 
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*temperature:30C
 
*temperature:30C

Revision as of 11:47, 20 August 2015

Strain Summary

Strain Name

AW518

Synonyms
Taxon Information
  • Pangenome: Escherichia coli
  • Subspecies and/or strain: Taxon: K-12
  • NCBI Taxonomy ID: NCBI Taxon ID: 83333
Genotype

Lambda- araC14 fhuA31 galK2(Oc) galT22 glnX44(AS) hisG4(Oc) lacY1 leuB6(Am) mgl-51 mtl-1 rfbC1 rpsL136(StrR) thiE1 thr-1 tsr-1 tsx-78 xylA5

Strain Reference

PMID:4884810[1]

Strain availability
Ancestry

parent:AW405

Annotated phenotypes


edit table

Notes

AW405 is a derivative of AW330. The his-4 allele was introduced from strain AT1372[2] by transduction with P1, followed by penicillin selection.[2]

Phenotype Annotation

Annotation ID not OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:47

OMP:0000005

presence of cell motility

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:35C
  • medium:semi-solid tryptone agar
 ECO:0000181

in vitro assay evidence

PMID:4916925[3]

OMP_AN:48

OMP:0007041

decreased positive chemotaxis

Relative to: OMP_AN:45

Genotype differences:

+tsr-1

Condition differences:

no differences

  • temperature:35C
  • medium:semi-solid tryptone agar
 ECO:0000181

in vitro assay evidence

PMID:4916925[3]

OMP_AN:49

OMP:0007041

decreased positive chemotaxis

Relative to: OMP_AN:46

Genotype differences:

+tsr-1

Condition differences:

medium:buffer + serine (CHEBIbuffer;serine (CHEBI

medium:buffer + serine (CHEBI:17115)

ECO:0000181

in vitro assay evidence

PMID:4916925[3]

OMP_AN:341

OMP:0007005

decreased negative chemotaxis

Relative to: OMP_AN:403

Genotype differences:

+tsr-1

Condition differences:

no differences

  • temperature:30C
  • medium:acetate
  • medium:chemotaxis medium
 ECO:0000181

in vitro assay evidence

PMID:333433[4]

Temporal assay

OMP_AN:342

OMP:0007005

decreased negative chemotaxis

Relative to: OMP_AN:404

Genotype differences:

+tsr-1

Condition differences:

no differences

  • temperature:30C
  • medium:benzoate
  • medium:chemotaxis medium
 ECO:0000181

in vitro assay evidence

PMID:333433[4]

Temporal assay

OMP_AN:343

OMP:0007005

decreased negative chemotaxis

Relative to: OMP_AN:405

Genotype differences:

+tsr-1

Condition differences:

no differences

  • temperature:30C
  • medium:chemotaxis medium
  • medium:indole
 ECO:0000181

in vitro assay evidence

PMID:333433[4]

Temporal assay

OMP_AN:344

OMP:0007005

decreased negative chemotaxis

Relative to: OMP_AN:406

Genotype differences:

+tsr-1

Condition differences:

no differences

  • temperature:30C
  • medium:chemotaxis medium
  • medium:leucine
 ECO:0000181

in vitro assay evidence

PMID:333433[4]

Temporal assay

OMP_AN:345

OMP:0007053

increased positive chemotaxis

Relative to: OMP_AN:105

Genotype differences:

+tsr-1

Condition differences:

no differences

  • temperature:30C
  • medium:aspartate
  • medium:chemotaxis medium
 ECO:0000181

in vitro assay evidence

PMID:333433[4]

Temporal assay

OMP_AN:346

OMP:0007053

increased positive chemotaxis

Relative to: OMP_AN:102

Genotype differences:

+tsr-1

Condition differences:

no differences

  • temperature:30C
  • medium:chemotaxis medium
  • medium:maltose
 ECO:0000181

in vitro assay evidence

PMID:333433[4]

Capillary assay

OMP_AN:347

OMP:0007053

increased positive chemotaxis

Relative to: OMP_AN:401

Genotype differences:

+tsr-1

Condition differences:

no differences

  • temperature:30C
  • medium:chemotaxis medium
  • medium:galactose
 ECO:0000181

in vitro assay evidence

PMID:333433[4]

Capillary assay

OMP_AN:348

OMP:0007053

increased positive chemotaxis

Relative to: OMP_AN:402

Genotype differences:

+tsr-1

Condition differences:

no differences

  • temperature:30C
  • medium:chemotaxis medium
  • medium:ribose
 ECO:0000181

in vitro assay evidence

PMID:333433[4]

Capillary assay

OMP_AN:349

OMP:0007054

increased negative chemotaxis

Relative to: OMP_AN:407

Genotype differences:

+tsr-1

Condition differences:

no differences

  • temperature:30C
  • medium:Ni(II)
  • medium:chemotaxis medium
 ECO:0000181

in vitro assay evidence

PMID:333433[4]

Temporal assay

OMP_AN:350

OMP:0007054

increased negative chemotaxis

Relative to: OMP_AN:408

Genotype differences:

+tsr-1

Condition differences:

no differences

  • temperature:30C
  • medium:Co(II)
  • medium:chemotaxis medium
 ECO:0000181

in vitro assay evidence

PMID:333433[4]

Temporal assay

edit table



Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ Armstrong, JB & Adler, J (1969) Location of genes for motility and chemotaxis on the Escherichia coli genetic map. J. Bacteriol. 97 156-61 PubMed OMPwiki page
  2. ↑ Armstrong, JB & Adler, J (1967) Genetics of motility in Escherichia coli: complementation of paralysed mutants. Genetics 56 363-73 PubMed OMPwiki page
  3. ↑ 3.0 3.1 3.2 Hazelbauer, GL et al. (1969) Escherichia coli mutants defective in chemotaxis toward specific chemicals. Proc. Natl. Acad. Sci. U.S.A. 64 1300-7 PubMed OMPwiki page
  4. ↑ 4.0 4.1 4.2 4.3 4.4 4.5 4.6 4.7 4.8 4.9 Springer, MS et al. (1977) Sensory transduction in Escherichia coli: two complementary pathways of information processing that involve methylated proteins. Proc. Natl. Acad. Sci. U.S.A. 74 3312-6 PubMed OMPwiki page

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