|
|
(14 intermediate revisions by 4 users not shown) |
Line 1: |
Line 1: |
− | __TOC__
| + | #redirect [[OMP_ST:773_!_Strain:Escherichia coli K-12 AW518]] |
− | | |
− | ==Strain Summary==
| |
− | <protect><!--box uid=d41d8cd98f00b204e9800998ecf8427e.5935.J556e2aea143ac-->
| |
− | <!--
| |
− | ******************************************************************************************
| |
− | *
| |
− | * ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. **
| |
− | *
| |
− | ****************************************************************************************** -->
| |
− | {| id="J556e2aea143ac" class=" tableEdit Strain_info_table"
| |
− | | |
− | |-
| |
− | !align=left align='left' bgcolor='#CCCCFF' |Strain Name
| |
− | ||
| |
− | AW518
| |
− | |-
| |
− | !align=left align='left' bgcolor='#CCCCFF' |Synonyms
| |
− | ||
| |
− | | |
− | |-
| |
− | !align=left align='left' bgcolor='#CCCCFF' |Taxon Information
| |
− | ||
| |
− | *Pangenome: Escherichia coli
| |
− | *Taxon: K-12
| |
− | *NCBI Taxon ID: [http://www.ncbi.nlm.nih.gov/taxonomy?term=83333 83333]
| |
− | |-
| |
− | !align=left align='left' bgcolor='#CCCCFF' |Genotype
| |
− | ||
| |
− | *other:Lambda-
| |
− | *other:araC14
| |
− | *other:fhuA31
| |
− | *other:galK2(Oc)
| |
− | *other:galT22
| |
− | *other:glnX44(AS)
| |
− | *other:hisG4(Oc)
| |
− | *other:lacY1
| |
− | *other:leuB6(Am)
| |
− | *other:mgl-51
| |
− | *other:mtl-1
| |
− | *other:rfbC1
| |
− | *other:rpsL136(StrR)
| |
− | *other:thiE1
| |
− | *other:thr-1
| |
− | *other:tsr-1
| |
− | *other:tsx-78
| |
− | *other:xylA5
| |
− | |-
| |
− | !align=left align='left' bgcolor='#CCCCFF' |Strain Reference
| |
− | ||
| |
− | PMID:4884810
| |
− | |-
| |
− | !align=left align='left' bgcolor='#CCCCFF' |Source
| |
− | ||
| |
− | | |
− | |-
| |
− | !align=left align='left' bgcolor='#CCCCFF' |Ancestry
| |
− | ||
| |
− | parent:AW405
| |
− | |-
| |
− | !align=left align='left' bgcolor='#CCCCFF' |Annotated phenotypes
| |
− | ||
| |
− | | |
− | | |
− | |- class="tableEdit_footer"
| |
− | |<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.5935.J556e2aea143ac&page=5935&pagename={{FULLPAGENAMEE}}&type=1&template=Strain_info_table edit table]</span> ||
| |
− | |}
| |
− | <noinclude>
| |
− | | |
− | </noinclude>
| |
− | <!--box uid=d41d8cd98f00b204e9800998ecf8427e.5935.J556e2aea143ac--></protect>
| |
− | | |
− | ==Notes==
| |
− | | |
− | AW405 is a derivative of AW330. The his-4 allele was introduced from strain AT1372[2] by transduction with P1, followed by penicillin selection.<ref name='PMID:4861166'/>
| |
− | | |
− | ==Phenotype Annotation==
| |
− | <protect><!--box uid=d41d8cd98f00b204e9800998ecf8427e.5935.Z556e2aea173f0-->
| |
− | <!--
| |
− | ******************************************************************************************
| |
− | *
| |
− | * ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. **
| |
− | *
| |
− | ****************************************************************************************** -->
| |
− | {| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="Z556e2aea173f0" class=" tableEdit OMP_annotation_table"
| |
− | |- align='left' bgcolor='#CCCCFF'
| |
− | !|Annotation ID!!not!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
| |
− | |-
| |
− | |
| |
− | OMP_AN:47
| |
− | |
| |
− | | |
− | |
| |
− | OMP:0000005
| |
− | |
| |
− | presence of cell motility
| |
− | |
| |
− | Relative to:
| |
− | <br>
| |
− | Genotype differences:<br>
| |
− | Nothing to compare<br/><br>
| |
− | Condition differences:<br>
| |
− | Nothing to compare<br/>
| |
− | |
| |
− | *temperature:35C
| |
− | *medium:semi-solid tryptone agar
| |
− | |
| |
− | ECO:0000181
| |
− | |
| |
− | in vitro assay evidence
| |
− | |
| |
− | PMID:4916925
| |
− | |
| |
− | | |
− | |
| |
− |
| |
− | |-
| |
− | |
| |
− | OMP_AN:48
| |
− | |
| |
− | | |
− | |
| |
− | OMP:0007041
| |
− | |
| |
− | decreased positive chemotaxis
| |
− | |
| |
− | Relative to:OMP_AN:45
| |
− | <br>
| |
− | Genotype differences:<br>
| |
− | +other:tsr-1 <br/><br>
| |
− | Condition differences:<br>
| |
− | no differences
| |
− | |
| |
− | *temperature:35C
| |
− | *medium:semi-solid tryptone agar
| |
− | |
| |
− | ECO:0000181
| |
− | |
| |
− | in vitro assay evidence
| |
− | |
| |
− | PMID:4916925
| |
− | |
| |
− | | |
− | |
| |
− |
| |
− | |-
| |
− | |
| |
− | OMP_AN:49
| |
− | |
| |
− | | |
− | |
| |
− | OMP:0007041
| |
− | |
| |
− | decreased positive chemotaxis
| |
− | |
| |
− | Relative to:OMP_AN:46
| |
− | <br>
| |
− | Genotype differences:<br>
| |
− | +other:tsr-1 <br/><br>
| |
− | Condition differences:<br>
| |
− | no differences
| |
− | |
| |
− | medium:buffer + serine (CHEBI:17115)
| |
− | |
| |
− | ECO:0000181
| |
− | |
| |
− | in vitro assay evidence
| |
− | |
| |
− | PMID:4916925
| |
− | |
| |
− | | |
− | |
| |
− |
| |
− | |-
| |
− | |
| |
− | OMP_AN:341
| |
− | |
| |
− | | |
− | |
| |
− | OMP:0007005
| |
− | |
| |
− | decreased negative chemotaxis
| |
− | |
| |
− | Relative to:
| |
− | <br>
| |
− | Genotype differences:<br>
| |
− | Nothing to compare<br/><br>
| |
− | Condition differences:<br>
| |
− | Nothing to compare<br/>
| |
− | |
| |
− | *temperature:30C
| |
− | *medium:chemotaxis medium + acetate
| |
− | |
| |
− | ECO:0000181
| |
− | |
| |
− | in vitro assay evidence
| |
− | |
| |
− | PMID:333433
| |
− | |
| |
− | | |
− | |
| |
− |
| |
− | |-
| |
− | |
| |
− | OMP_AN:342
| |
− | |
| |
− | | |
− | |
| |
− | OMP:0007005
| |
− | |
| |
− | decreased negative chemotaxis
| |
− | |
| |
− | Relative to:
| |
− | <br>
| |
− | Genotype differences:<br>
| |
− | Nothing to compare<br/><br>
| |
− | Condition differences:<br>
| |
− | Nothing to compare<br/>
| |
− | |
| |
− | *temperature:30C
| |
− | *medium:chemotaxis medium + benzoate
| |
− | |
| |
− | ECO:0000181
| |
− | |
| |
− | in vitro assay evidence
| |
− | |
| |
− | PMID:333433
| |
− | |
| |
− | | |
− | |
| |
− |
| |
− | |-
| |
− | |
| |
− | OMP_AN:343
| |
− | |
| |
− | | |
− | |
| |
− | OMP:0007005
| |
− | |
| |
− | decreased negative chemotaxis
| |
− | |
| |
− | Relative to:
| |
− | <br>
| |
− | Genotype differences:<br>
| |
− | Nothing to compare<br/><br>
| |
− | Condition differences:<br>
| |
− | Nothing to compare<br/>
| |
− | |
| |
− | *temperature:30C
| |
− | *medium:chemotaxis medium + indole
| |
− | |
| |
− | ECO:0000181
| |
− | |
| |
− | in vitro assay evidence
| |
− | |
| |
− | PMID:333433
| |
− | |
| |
− | | |
− | |
| |
− |
| |
− | |-
| |
− | |
| |
− | OMP_AN:344
| |
− | |
| |
− | | |
− | |
| |
− | OMP:0007005
| |
− | |
| |
− | decreased negative chemotaxis
| |
− | |
| |
− | Relative to:
| |
− | <br>
| |
− | Genotype differences:<br>
| |
− | Nothing to compare<br/><br>
| |
− | Condition differences:<br>
| |
− | Nothing to compare<br/>
| |
− | |
| |
− | *temperature:30C
| |
− | *medium:chemotaxis medium + leucine
| |
− | |
| |
− | ECO:0000181
| |
− | |
| |
− | in vitro assay evidence
| |
− | |
| |
− | PMID:333433
| |
− | |
| |
− | | |
− | |
| |
− |
| |
− | | |
− | |- class="tableEdit_footer"
| |
− | |<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.5935.Z556e2aea173f0&page=5935&pagename={{FULLPAGENAMEE}}&type=0&template=OMP_annotation_table edit table]</span> || || || || || || || || || ||
| |
− | |}
| |
− | <noinclude>
| |
− | <!-- OMP category tags -->[[Category:Strains that need OMP_ST accessions]]
| |
− | </noinclude>
| |
− | <!--box uid=d41d8cd98f00b204e9800998ecf8427e.5935.Z556e2aea173f0--></protect>
| |
− | | |
− | | |
− | ==Additional Information==
| |
− | | |
− | | |
− | ==Links==
| |
− | | |
− | | |
− | ==References==
| |
− | {{RefHelp}}<references/>
| |
− | | |
− | [[Category:Strain:Escherichia coli K-12 AW405]]
| |
Pages in category "Strain:Escherichia coli K-12 AW518"
This category contains only the following page.