Difference between revisions of "OMP ST:794 ! Burkholderia contaminans MS14 MS14GG78"

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*Pangenome: Burkholderia contaminans
 
*Pangenome: Burkholderia contaminans
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*Taxon: MS14
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*Subspecies and/or strain: Taxon: MS14
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*NCBI Taxon ID: [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=488447&lvl=3&p=mapview&p=has_linkout&p=blast_url&p=genome_blast&lin=f&keep=1&srchmode=1&unlock 488447]
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*NCBI Taxonomy ID: NCBI Taxon ID: [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=488447&lvl=3&p=mapview&p=has_linkout&p=blast_url&p=genome_blast&lin=f&keep=1&srchmode=1&unlock 488447]
 
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!align=left align='left' bgcolor='#CCCCFF' |Genotype
 
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other:ocfJ::nptII
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ocfJ::nptII
 
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!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
 
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!|Annotation ID!!not!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
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!|Annotation ID!!Qualifier!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
 
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<hr>Genotype differences:<br>
 
<hr>Genotype differences:<br>
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<hr>Condition differences:<br>
 
<hr>Condition differences:<br>
 
no differences
 
no differences

Latest revision as of 13:25, 6 June 2017

Strain Summary

Strain Name

MS14GG78

Synonyms
Taxon Information
  • Pangenome: Burkholderia contaminans
  • Subspecies and/or strain: Taxon: MS14
  • NCBI Taxonomy ID: NCBI Taxon ID: 488447
Genotype

ocfJ::nptII

Strain Reference

PMID:21742901[1]

Strain availability
Ancestry

parent:MS14

Annotated phenotypes


edit table


Notes

Phenotype Annotation

Annotation ID Qualifier OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:96

OMP:0006178

abolished antimicrobial peptide production

Relative to: OMP_AN:89

Genotype differences:

+ocfJ -

Condition differences:

no differences

  • other:Indicator fungus-Geotrichum candidum
  • temperature:25 C
  • medium:100 mL PDA
 ECO:0000182

in vitro culture assay evidence

PMID:21742901[1]


edit table



Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ 1.0 1.1 Gu, G et al. (2011) Genetic and biochemical map for the biosynthesis of occidiofungin, an antifungal produced by Burkholderia contaminans strain MS14. Appl. Environ. Microbiol. 77 6189-98 PubMed OMPwiki page
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