Difference between revisions of "OMP ST:790 ! Burkholderia contaminans MS14 MS14MT13"

From OMPwiki
(touch)
(touch)
Line 23: Line 23:
 
||
 
||
 
*Pangenome: Burkholderia contaminans
 
*Pangenome: Burkholderia contaminans
−
*Taxon: MS14
+
*Subspecies and/or strain: Taxon: MS14
−
*NCBI Taxon ID: [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=488447&lvl=3&p=mapview&p=has_linkout&p=blast_url&p=genome_blast&lin=f&keep=1&srchmode=1&unlock 488447]
+
*NCBI Taxonomy ID: NCBI Taxon ID: [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=488447&lvl=3&p=mapview&p=has_linkout&p=blast_url&p=genome_blast&lin=f&keep=1&srchmode=1&unlock 488447]
 
|-
 
|-
 
!align=left align='left' bgcolor='#CCCCFF' |Genotype
 
!align=left align='left' bgcolor='#CCCCFF' |Genotype
 
||
 
||
−
other:ORF5(ACL81527)::Tn5
+
ORF5(ACL81527)::Tn5
 
|-
 
|-
 
!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
 
!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
Line 47: Line 47:
  
 
|- class="tableEdit_footer"  
 
|- class="tableEdit_footer"  
−
|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.6057.R5579e0fb6c600&page=6057&pagename={{FULLPAGENAMEE}}&type=1&template=Strain_info_table edit table]</div> ||
+
|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.6057.R5579e0fb6c600&page=6990&pagename={{FULLPAGENAMEE}}&type=1&template=Strain_info_table edit table]</div> ||
 
|}
 
|}
 
<noinclude>
 
<noinclude>
−
<!-- OMP category tags -->[[Category:Strains that need OMP_ST accessions]]
+
<!-- OMP category tags -->
 
</noinclude>
 
</noinclude>
 
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.6057.R5579e0fb6c600--></protect>
 
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.6057.R5579e0fb6c600--></protect>

Revision as of 14:02, 21 June 2016

Strain Summary

Strain Name

MS14MT13

Synonyms
Taxon Information
  • Pangenome: Burkholderia contaminans
  • Subspecies and/or strain: Taxon: MS14
  • NCBI Taxonomy ID: NCBI Taxon ID: 488447
Genotype

ORF5(ACL81527)::Tn5

Strain Reference

PMID:19167363[1]

Strain availability
Ancestry

parent:MS14

Annotated phenotypes


edit table


Notes

Phenotype Annotation

Annotation ID not OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:91

OMP:0006178

abolished antimicrobial peptide production

Relative to: OMP_AN:89

Genotype differences:

+other:ORF5(ACL81527)::Tn5 -

Condition differences:

no differences

  • other:Indicator fungus-Geotrichum candidum
  • temperature:25 C
  • medium:100 mL PDA
 ECO:0000182

in vitro culture assay evidence

PMID:19167363[1]


edit table



Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ 1.0 1.1 Gu, G et al. (2009) Biosynthesis of an antifungal oligopeptide in Burkholderia contaminans strain MS14. Biochem. Biophys. Res. Commun. 380 328-32 PubMed OMPwiki page
Retrieved from "https://microbialphenotypes.org/wiki/index.php?title=OMP_ST:790_!_Burkholderia_contaminans_MS14_MS14MT13&oldid=19601"