Difference between revisions of "Sandbox"

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!align=left align='left' bgcolor='#CCCCFF' |Strain Name
 
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BW25113
 
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!align=left align='left' bgcolor='#CCCCFF' |Synonyms
 
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!align=left align='left' bgcolor='#CCCCFF' |Taxon Information
 
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*Pangenome: Eschericia coli
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*Subspecies and/or strain: K-12
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*NCBI Taxonomy ID: 83333
 
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!align=left align='left' bgcolor='#CCCCFF' |Genotype
 
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F-, DE(araD-araB)567, lacZ4787(del)(::rrnB-3), LAM-, rph-1, DE(rhaD-rhaB)568, hsdR514
 
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!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
 
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*other:[http://cgsc.biology.yale.edu/Strain.php?ID=64667 CGSC]
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*PMID:10829079
 
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!align=left align='left' bgcolor='#CCCCFF' |Strain availability
 
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[http://cgsc.biology.yale.edu/Strain.php?ID=64667 CGSC]
 
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!align=left align='left' bgcolor='#CCCCFF' |Ancestry
 
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ancestor:W1485
 
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!align=left align='left' bgcolor='#CCCCFF' |Annotated phenotypes
 
!align=left align='left' bgcolor='#CCCCFF' |Annotated phenotypes
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Revision as of 15:32, 13 June 2016

Strain Name

BW25113

Synonyms
Taxon Information
  • Pangenome: Eschericia coli
  • Subspecies and/or strain: K-12
  • NCBI Taxonomy ID: 83333
Genotype

F-, DE(araD-araB)567, lacZ4787(del)(::rrnB-3), LAM-, rph-1, DE(rhaD-rhaB)568, hsdR514

Strain Reference
Strain availability

CGSC

Ancestry

ancestor:W1485

Annotated phenotypes


how do I add italics?


Phenotype of Taxon Information Genotype Information (if known) Condition Information OMP ID OMP Term Name ECO ID ECO Term Name Notes Status

a mutation or genetic difference within a strain

  • Taxon: Taxon Escherichia coli/n*Strain/n*Substrain/n*TaxonID
  • Genotype of Reference Strain:
  • Reference Condition:

a mutation or genetic difference within a strain

  • Taxon: A
  • Strain: B
  • Substrain: C
  • NCBI Taxon ID: D
  • Genotype of Reference Strain:
  • Reference Condition:

A

  • Taxon: Escherichia coli
  • Strain: K-12
  • Substrain: MG1655
  • Genotype of Reference Strain:
  • Reference Condition:

a mutation or genetic difference within a strain

  • Taxon: A
  • Strain: B
  • Substrain: C
  • NCBI Taxon ID: D
  • Genotype of Reference Strain:
  • Reference Condition:
  • Experimental Condition: 10 mM aspartate




Testing things have been moved over to the development site. If this code doesn't work there, then we've got a problem. --DanielRenfro 21:05, 5 May 2011 (UTC)


<methodinput> type=create bgcolor = #dddddd labeltext=Create a new Methods page: editintro=MediaWiki: buttonlabel=Create preload=Template:Method width=32 break=no </methodinput>


Annotation ID not OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:50

OMP:0000017

presence of endospore formation

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30
  • medium:sporulation medium

PMID:2842295[2]

OMP_AN:51

OMP:0000035

malformed pilus

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

temperature:37

PMID:12736[3]



  1. Datsenko, KA & Wanner, BL (2000) One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc. Natl. Acad. Sci. U.S.A. 97 6640-5 PubMed OMPwiki page
  2. Kato, J et al. (1988) Gene organization in the region containing a new gene involved in chromosome partition in Escherichia coli. J. Bacteriol. 170 3967-77 PubMed OMPwiki page
  3. Piggot, PJ & Coote, JG (1976) Genetic aspects of bacterial endospore formation. Bacteriol Rev 40 908-62 PubMed OMPwiki page