Difference between revisions of "OMP ST:9002 ! Saccharomyces cerevisiae BY4741"

From OMPwiki
(Table edited by Peterwu via TableEdit)
(Table edited by $2 via TableEdit)
 
(4 intermediate revisions by one other user not shown)
Line 62: Line 62:
 
******************************************************************************************
 
******************************************************************************************
 
*  
 
*  
−
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
+
** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
 
*  
 
*  
 
****************************************************************************************** -->
 
****************************************************************************************** -->
Line 123: Line 123:
 
[http://www.ebi.ac.uk/chebi/searchId.do?chebiId=CHEBI:28260 CHEBI:28260] galactose
 
[http://www.ebi.ac.uk/chebi/searchId.do?chebiId=CHEBI:28260 CHEBI:28260] galactose
 
|
 
|
−
2% w/v (111mM) galactose   
+
2% w/v (111mM) galactose   
 
|-  
 
|-  
 
|
 
|
Line 222: Line 222:
 
OMP:0007771
 
OMP:0007771
 
|
 
|
−
 
+
presence of population growth at alkaline pH
 
|
 
|
 
Relative to:  
 
Relative to:  
Line 251: Line 251:
 
OMP:0007773
 
OMP:0007773
 
|
 
|
−
does not require growth factor(s)
+
presence of population growth on defined medium
 
|
 
|
 
Relative to:  
 
Relative to:  
Line 279: Line 279:
 
OMP:0007773
 
OMP:0007773
 
|
 
|
−
 
+
presence of population growth on defined medium
 
|
 
|
 
Relative to:  
 
Relative to:  
Line 288: Line 288:
 
Nothing to compare<br/>
 
Nothing to compare<br/>
 
|
 
|
−
medium:minimal medium + his/leu/ura
+
medium:synthetic minimal medium + his/leu/ura
 
|
 
|
 
ECO:0000336
 
ECO:0000336
Line 307: Line 307:
 
OMP:0007773
 
OMP:0007773
 
|
 
|
−
does not require growth factor(s)
+
presence of population growth on defined medium
 
|
 
|
 
Relative to:  
 
Relative to:  
Line 335: Line 335:
 
OMP:0007773
 
OMP:0007773
 
|
 
|
−
 
+
presence of population growth on defined medium
 
|
 
|
 
Relative to:  
 
Relative to:  
Line 353: Line 353:
 
|
 
|
 
[http://www.ebi.ac.uk/chebi/searchId.do?chebiId=CHEBI:16857 CHEBI:16857] L-threonine
 
[http://www.ebi.ac.uk/chebi/searchId.do?chebiId=CHEBI:16857 CHEBI:16857] L-threonine
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:22746
 +
|
 +
 +
|
 +
OMP:0007773
 +
|
 +
presence of population growth on defined medium
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
medium:synthetic complete medium - tryptophan
 +
|
 +
ECO:0000336
 +
|
 +
competitive growth assay evidence
 +
|
 +
PMID:12140549
 +
|
 +
[http://www.ebi.ac.uk/chebi/searchId.do?chebiId=CHEBI:16828 CHEBI:16828] L-tryptophan
 
|
 
|
 
   
 
   

Latest revision as of 15:14, 5 July 2021

Strain Summary

Strain Name

Saccharomyces cerevisiae BY4741

Synonyms

ATCC 201388

Taxon Information
  • Pangenome: Saccharomyces cerevisiae
  • Subspecies and/or strain: BY4741
  • NCBI Taxonomy ID: 1247190
Genotype

MATa his3-delta1 leu2-delta0 met15-delta0 ura3-delta0

Strain Reference

PMID:9483801[1]

Strain availability

Dharmacon

ATCC

Ancestry

ancestor:OMP ST:8810 ! Saccharomyces cerevisiae S288C

Annotated phenotypes


edit table


Notes

Phenotype Annotation

Annotation ID Qualifier OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:22734

OMP:0007460

viable vegetative cell population

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare

medium:YPD

ECO:0005004

cell viability assay evidence

PMID:12140549[2]

OMP_AN:22737

OMP:0006024

heterotrophic

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare

medium:YPGal

ECO:0000336

competitive growth assay evidence

PMID:12140549[2]

CHEBI:28260 galactose

2% w/v (111mM) galactose

OMP_AN:22738

OMP:0007517

presence of growth under high osmolarity

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • medium:YPD
  • medium:glucitol (sorbitol) 1.5M
 ECO:0000336

competitive growth assay evidence

PMID:12140549[2]

CHEBI:30911 glucitol

OMP_AN:22739

OMP:0006039

resistant to macrolide

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • medium:YPD
  • medium:nystatin (10 uM)
 ECO:0000336

competitive growth assay evidence

PMID:12140549[2]

CHEBI:7660 nystatin

OMP_AN:22740

OMP:0007517

presence of growth under high osmolarity

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • medium:NaCl (1M)
  • medium:YPD
 ECO:0000336

competitive growth assay evidence

PMID:12140549[2]

CHEBI:30911 NaCl

OMP_AN:22741

OMP:0007771

presence of population growth at alkaline pH

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • pH:8.0
  • medium:YPD
 ECO:0000336

competitive growth assay evidence

PMID:12140549[2]

OMP_AN:22742

OMP:0007773

presence of population growth on defined medium

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare

medium:synthetic complete medium (SC)

ECO:0000336

competitive growth assay evidence

PMID:12140549[2]

OMP_AN:22743

OMP:0007773

presence of population growth on defined medium

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare

medium:synthetic minimal medium + his/leu/ura

ECO:0000336

competitive growth assay evidence

PMID:12140549[2]

CHEBI:15971 L-histidine CHEBI:15603 L-leucine CHEBI:17568 uracil

OMP_AN:22744

OMP:0007773

presence of population growth on defined medium

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare

medium:synthetic complete medium - lysine

ECO:0000336

competitive growth assay evidence

PMID:12140549[2]

CHEBI:26710 L-lysine

OMP_AN:22745

OMP:0007773

presence of population growth on defined medium

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare

medium:synthetic complete medium - threonine

ECO:0000336

competitive growth assay evidence

PMID:12140549[2]

CHEBI:16857 L-threonine

OMP_AN:22746

OMP:0007773

presence of population growth on defined medium

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare

medium:synthetic complete medium - tryptophan

ECO:0000336

competitive growth assay evidence

PMID:12140549[2]

CHEBI:16828 L-tryptophan


edit table


Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ Brachmann, CB et al. (1998) Designer deletion strains derived from Saccharomyces cerevisiae S288C: a useful set of strains and plasmids for PCR-mediated gene disruption and other applications. Yeast 14 115-32 PubMed OMPwiki page
  2. ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 Giaever, G et al. (2002) Functional profiling of the Saccharomyces cerevisiae genome. Nature 418 387-91 PubMed OMPwiki page
Retrieved from "https://microbialphenotypes.org/wiki/index.php?title=OMP_ST:9002_!_Saccharomyces_cerevisiae_BY4741&oldid=143629"