Difference between revisions of "OMP ST:1963 ! Schizosaccharomyces pombe arp8delta"

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==Strain Summary==
 
==Strain Summary==
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{|  id="Z57e0044b3e04d"  class=" tableEdit Strain_info_table" 
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!align=left align='left' bgcolor='#CCCCFF' |Strain Name
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Schizosaccharomyces pombe arp8delta
 +
|-
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!align=left align='left' bgcolor='#CCCCFF' |Synonyms
 +
||
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 +
|-
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!align=left align='left' bgcolor='#CCCCFF' |Taxon Information
 +
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*Pangenome: Schizosaccharomyces pombe
 +
*Subspecies and/or strain: arp8delta
 +
*NCBI Taxonomy ID:4896
 +
|-
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!align=left align='left' bgcolor='#CCCCFF' |Genotype
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||
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ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32 arp8delta
 +
|-
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!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
 +
||
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PMID:20473289
 +
|-
 +
!align=left align='left' bgcolor='#CCCCFF' |Strain availability
 +
||
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http://us.bioneer.com/products/spombe/spombeoverview.aspx
 +
|-
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!align=left align='left' bgcolor='#CCCCFF' |Ancestry
 +
||
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parent:OMP ST:1112 ! Schizosaccharomyces pombe SP286
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|-
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!align=left align='left' bgcolor='#CCCCFF' |Annotated phenotypes
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==Phenotype Annotation==
 
==Phenotype Annotation==
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{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="O57e0044b3fc2a"  class=" tableEdit OMP_annotation_table dataTable" 
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!|Annotation ID!!Qualifier!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
 +
|-
 +
|
 +
OMP_AN:2250
 +
|
 +
 
 +
|
 +
OMP:0007460
 +
|
 +
viable vegetative cell population
 +
|
 +
Relative to: OMP_AN:1028
 +
 
 +
<hr>Genotype differences:<br>
 +
+arp8delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
:?
 +
temperature:?25-32C
 +
|
 +
 
 +
|
 +
 
 +
|
 +
 
 +
|
 +
PMID:20473289
 +
|
 +
 
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:10089
 +
|
 +
 
 +
|
 +
OMP:0007460
 +
|
 +
viable vegetative cell population
 +
|
 +
Relative to: OMP_AN:1028
 +
 
 +
<hr>Genotype differences:<br>
 +
+arp8delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
:?
 +
temperature:?25-32C
 +
|
 +
 
 +
|
 +
 
 +
|
 +
 
 +
|
 +
PMID:23697806
 +
|
 +
 
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:18509
 +
|
 +
NOT
 +
|
 +
OMP:0007713
 +
|
 +
altered vegetative cell size
 +
|
 +
Relative to: OMP_AN:1028
 +
 
 +
<hr>Genotype differences:<br>
 +
+arp8delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
:?
 +
temperature:?25-32C
 +
|
 +
 
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 +
|
 +
 
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:19029
 +
|
 +
 
 +
|
 +
OMP:0007708
 +
|
 +
altered vegetative cell shape
 +
|
 +
Relative to: OMP_AN:1028
 +
 
 +
<hr>Genotype differences:<br>
 +
+arp8delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
:?
 +
temperature:?25-32C
 +
|
 +
 
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 +
|
 +
 
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:19245
 +
|
 +
 
 +
|
 +
OMP:0007716
 +
|
 +
viable vegetative cell
 +
|
 +
Relative to: OMP_AN:1028
 +
 
 +
<hr>Genotype differences:<br>
 +
+arp8delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
:?
 +
temperature:?25-32C
 +
|
 +
 
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 +
|
 +
 
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:26671
 +
|
 +
 
 +
|
 +
OMP:0007788
 +
|
 +
 
 +
|
 +
Relative to: OMP_AN:1028
 +
 
 +
<hr>Genotype differences:<br>
 +
+arp8delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
:?
 +
temperature:?25-32C
 +
|
 +
 
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 +
|
 +
 
 +
|
 +
 +
 
 +
|- class="tableEdit_footer"
 +
|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.9573.O57e0044b3fc2a&page=9573&pagename={{FULLPAGENAMEE}}&type=0&template=OMP_annotation_table edit table]</div> || || || || || || || || || ||
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Latest revision as of 12:20, 11 June 2018

Strain Summary

Strain Name

Schizosaccharomyces pombe arp8delta

Synonyms
Taxon Information
  • Pangenome: Schizosaccharomyces pombe
  • Subspecies and/or strain: arp8delta
  • NCBI Taxonomy ID:4896
Genotype

ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32 arp8delta

Strain Reference

PMID:20473289[1]

Strain availability

http://us.bioneer.com/products/spombe/spombeoverview.aspx

Ancestry

parent:OMP ST:1112 ! Schizosaccharomyces pombe SP286

Annotated phenotypes


edit table


Notes

Phenotype Annotation

Showing 1 to 6 of 6 entries
Annotation IDQualifierOMP IDOMP term nameRelative phenotype informationExperimental conditionECO IDECO term nameReferenceAnnotation ExtensionNotes

OMP_AN:10089

OMP:0007460

viable vegetative cell population

Relative to: OMP_AN:1028

Genotype differences:

+arp8delta -h+/h+

Condition differences:
?

temperature:?25-32C

PMID:23697806[2]

OMP_AN:18509

NOT

OMP:0007713

altered vegetative cell size

Relative to: OMP_AN:1028

Genotype differences:

+arp8delta -h+/h+

Condition differences:
?

temperature:?25-32C

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:19029

OMP:0007708

altered vegetative cell shape

Relative to: OMP_AN:1028

Genotype differences:

+arp8delta -h+/h+

Condition differences:
?

temperature:?25-32C

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:19245

OMP:0007716

viable vegetative cell

Relative to: OMP_AN:1028

Genotype differences:

+arp8delta -h+/h+

Condition differences:
?

temperature:?25-32C

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:2250

OMP:0007460

viable vegetative cell population

Relative to: OMP_AN:1028

Genotype differences:

+arp8delta -h+/h+

Condition differences:
?

temperature:?25-32C

PMID:20473289[1]

OMP_AN:26671

OMP:0007788

Relative to: OMP_AN:1028

Genotype differences:

+arp8delta -h+/h+

Condition differences:
?

temperature:?25-32C

ECO:0001098

microscopy evidence

PMID:23697806[2]


Showing 1 to 6 of 6 entries
edit table


Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ Jump up to: 1.0 1.1 Kim, DU et al. (2010) Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe. Nat. Biotechnol. 28 617-623 PubMed OMPwiki page
  2. ↑ Jump up to: 2.0 2.1 2.2 2.3 2.4 Hayles, J et al. (2013) A genome-wide resource of cell cycle and cell shape genes of fission yeast. Open Biol 3 130053 PubMed OMPwiki page
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