View source for OMP ST:73799 ! Escherichia coli K-12 JW4038

__TOC__

==Strain Summary==
<protect><!--box uid=d41d8cd98f00b204e9800998ecf8427e.31093.E5b510857d567d-->
<!--
******************************************************************************************
* 
** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** 
* 
****************************************************************************************** -->
{|   id="E5b510857d567d"  class=" tableEdit Strain_info_table"  

|-
!align=left align='left' bgcolor='#CCCCFF' |Strain Name
||
Escherichia coli K-12 JW4038
|-
!align=left align='left' bgcolor='#CCCCFF' |Synonyms
||
JW4038-1
|-
!align=left align='left' bgcolor='#CCCCFF' |Taxon Information
||
*Pangenome: Escherichia coli
*Subspecies and/or strain: K-12
*NCBI Taxonomy ID: [http://www.ncbi.nlm.nih.gov/taxonomy?term=83333 83333]
|-
!align=left align='left' bgcolor='#CCCCFF' |Genotype
||
DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 gltP772(del)::FRT-kan-FRT
|-
!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
||
*PMID:16738554
*[http://cgsc2.biology.yale.edu/Strain.php?ID=109187 Coli Genetic Stock Center]
|-
!align=left align='left' bgcolor='#CCCCFF' |Strain availability
||
[http://cgsc2.biology.yale.edu/Strain.php?ID=109187 Coli Genetic Stock Center]
|-
!align=left align='left' bgcolor='#CCCCFF' |Ancestry
||
parent: [[OMP ST:800 ! Escherichia coli K-12 BW25113]]
|-
!align=left align='left' bgcolor='#CCCCFF' |Annotated phenotypes
||


|- class="tableEdit_footer" 
|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.31093.E5b510857d567d&page=31093&pagename={{FULLPAGENAMEE}}&type=1&template=Strain_info_table edit table]</div> ||
|}
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.31093.E5b510857d567d--></protect>


==Notes==


==Phenotype Annotation==
<protect><!--box uid=d41d8cd98f00b204e9800998ecf8427e.31093.T5b510857d67ce-->
<!--
******************************************************************************************
* 
** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** 
* 
****************************************************************************************** -->
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="T5b510857d67ce"  class=" tableEdit OMP_annotation_table dataTable"  
|- align='left' bgcolor='#CCCCFF'
!|Annotation ID!!Qualifier!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
|- 
|
OMP_AN:35042
|

|
OMP:0007879
|
decreased resistance to an antimicrobial agent
|
Relative to: OMP_AN:27561

<hr>Genotype differences:<br>
+lacZ4787(del)( +gltP772(del)  -lacZ4787(del)
<hr>Condition differences:<br>
no differences
|

*temperature:37C
*medium:LB agar
*medium:Bleomycin sulfate
|
ECO:0007005
|
high throughput direct assay evidence used in manual assertion
|
PMID:21185072
|
towards some (CHEBI:34582) Bleomycin sulfate
|

*chemical concentration= 0.1 ug/ml
*normalized fitness= -3.8 
|- 
|
OMP_AN:35043
|

|
OMP:0007249
|
decreased resistance to a chemical
|
Relative to: OMP_AN:27513

<hr>Genotype differences:<br>
+lacZ4787(del)( +gltP772(del)  -lacZ4787(del)
<hr>Condition differences:<br>
no differences
|

*temperature:37C
*medium:LB agar
*medium:Phenazine methosulfate (PMS)
|
ECO:0007005
|
high throughput direct assay evidence used in manual assertion
|
PMID:21185072
|
towards some (CHEBI:8055) Phenazine methosulfate (PMS)
|

*chemical concentration=  0.1 mM
*normalized fitness= -3.89 
|- 
|
OMP_AN:35044
|

|
OMP:0006057
|
decreased resistance to aminoglycoside
|
Relative to: OMP_AN:27529

<hr>Genotype differences:<br>
+lacZ4787(del)( +gltP772(del)  -lacZ4787(del)
<hr>Condition differences:<br>
no differences
|

*temperature:37C
*medium:LB agar
*medium:Tobramycin
|
ECO:0007005
|
high throughput direct assay evidence used in manual assertion
|
PMID:21185072
|
towards some (CHEBI:28864) Tobramycin
|

*chemical concentration= 0.05 ug/ml
*normalized fitness= -3.87 
|- 
|
OMP_AN:35045
|

|
OMP:0007011
|
increased population growth at alkaline pH
|
Relative to: OMP_AN:27623

<hr>Genotype differences:<br>
+lacZ4787(del)( +gltP772(del)  -lacZ4787(del)
<hr>Condition differences:<br>
no differences
|

*temperature:37C
*medium:LB agar
*medium:TAPS
|
ECO:0007005
|
high throughput direct assay evidence used in manual assertion
|
PMID:21185072
|
towards some (**SID:24900259) TAPS
|

*chemical concentration=  9 
*normalized fitness= 4.38 

|- class="tableEdit_footer" 
|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.31093.T5b510857d67ce&page=31093&pagename={{FULLPAGENAMEE}}&type=0&template=OMP_annotation_table edit table]</div> || || || || || || || || || ||
|}
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.31093.T5b510857d67ce--></protect>


==Additional Information==


==Links==


==References==
{{RefHelp}}<references/>