View source for OMP ST:73574 ! Escherichia coli K-12 JW3644

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==Strain Summary==
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!align=left align='left' bgcolor='#CCCCFF' |Strain Name
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Escherichia coli K-12 JW3644
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!align=left align='left' bgcolor='#CCCCFF' |Synonyms
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JW3644-1
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!align=left align='left' bgcolor='#CCCCFF' |Taxon Information
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*Pangenome: Escherichia coli
*Subspecies and/or strain: K-12
*NCBI Taxonomy ID: [http://www.ncbi.nlm.nih.gov/taxonomy?term=83333 83333]
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!align=left align='left' bgcolor='#CCCCFF' |Genotype
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DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 uhpA774(del)::FRT-kan-FRT
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!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
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*PMID:16738554
*[http://cgsc2.biology.yale.edu/Strain.php?ID=108956 Coli Genetic Stock Center]
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!align=left align='left' bgcolor='#CCCCFF' |Strain availability
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[http://cgsc2.biology.yale.edu/Strain.php?ID=108956 Coli Genetic Stock Center]
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!align=left align='left' bgcolor='#CCCCFF' |Ancestry
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parent: [[OMP ST:800 ! Escherichia coli K-12 BW25113]]
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!align=left align='left' bgcolor='#CCCCFF' |Annotated phenotypes
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==Notes==


==Phenotype Annotation==
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!|Annotation ID!!Qualifier!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
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OMP_AN:33976
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OMP:0007249
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decreased resistance to a chemical
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Relative to: OMP_AN:27594

<hr>Genotype differences:<br>
+lacZ4787(del)( +uhpA774(del)  -lacZ4787(del)
<hr>Condition differences:<br>
no differences
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*temperature:37C
*medium:LB agar
*medium:SDS (CHEBI:8984) +EDTA (CHEBI:64758)
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ECO:0007005
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high throughput direct assay evidence used in manual assertion
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PMID:21185072
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towards some (CHEBI:64758 + CHEBI:8984) SDS (CHEBI:8984) +EDTA (CHEBI:64758)
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*chemical concentration=  0.5%/0.5mM %/0.5mM
*normalized fitness= -3.37 
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OMP_AN:33977
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OMP:0007902
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increased resistance to bile acids
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Relative to: OMP_AN:27586

<hr>Genotype differences:<br>
+lacZ4787(del)( +uhpA774(del)  -lacZ4787(del)
<hr>Condition differences:<br>
no differences
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*temperature:37C
*medium:LB agar
*medium:Deoxycholate sodium
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ECO:0007005
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high throughput direct assay evidence used in manual assertion
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PMID:21185072
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towards some (CHEBI:9177) Deoxycholate sodium
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*chemical concentration=  2 %
*normalized fitness= 3.29 
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OMP_AN:33978
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OMP:0007075
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decreased growth factor requirement
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Relative to: OMP_AN:27603

<hr>Genotype differences:<br>
+lacZ4787(del)( +uhpA774(del)  -lacZ4787(del)
<hr>Condition differences:<br>
no differences
|

*temperature:37C
*medium:M9
*medium:D-Glucose anhydrous
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ECO:0007005
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high throughput direct assay evidence used in manual assertion
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PMID:21185072
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towards some (CHEBI:42758) D-Glucose anhydrous
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*chemical concentration= 0.2%
*normalized fitness= -3.88 
|- 
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OMP_AN:33979
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OMP:0007070
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decreased organic carbon source utilization
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Relative to: OMP_AN:27613

<hr>Genotype differences:<br>
+lacZ4787(del)( +uhpA774(del)  -lacZ4787(del)
<hr>Condition differences:<br>
no differences
|

*temperature:37C
*medium:M9
*medium:D-Glucose anhydrous
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ECO:0007005
|
high throughput direct assay evidence used in manual assertion
|
PMID:21185072
|
towards some (CHEBI:42758) D-Glucose anhydrous
|

*chemical concentration= 0.2%
*normalized fitness= -3.88 

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==Additional Information==


==Links==


==References==
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