View source for OMP ST:73562 ! Escherichia coli K-12 JW3627

__TOC__

==Strain Summary==
<protect><!--box uid=d41d8cd98f00b204e9800998ecf8427e.30856.J5b510808c711a-->
<!--
******************************************************************************************
* 
** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** 
* 
****************************************************************************************** -->
{|   id="J5b510808c711a"  class=" tableEdit Strain_info_table"  

|-
!align=left align='left' bgcolor='#CCCCFF' |Strain Name
||
Escherichia coli K-12 JW3627
|-
!align=left align='left' bgcolor='#CCCCFF' |Synonyms
||
JW3627-1
|-
!align=left align='left' bgcolor='#CCCCFF' |Taxon Information
||
*Pangenome: Escherichia coli
*Subspecies and/or strain: K-12
*NCBI Taxonomy ID: [http://www.ncbi.nlm.nih.gov/taxonomy?term=83333 83333]
|-
!align=left align='left' bgcolor='#CCCCFF' |Genotype
||
DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 recG756(del)::FRT-kan-FRT
|-
!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
||
*PMID:16738554
*[http://cgsc2.biology.yale.edu/Strain.php?ID=108946 Coli Genetic Stock Center]
|-
!align=left align='left' bgcolor='#CCCCFF' |Strain availability
||
[http://cgsc2.biology.yale.edu/Strain.php?ID=108946 Coli Genetic Stock Center]
|-
!align=left align='left' bgcolor='#CCCCFF' |Ancestry
||
parent: [[OMP ST:800 ! Escherichia coli K-12 BW25113]]
|-
!align=left align='left' bgcolor='#CCCCFF' |Annotated phenotypes
||


|- class="tableEdit_footer" 
|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.30856.J5b510808c711a&page=30856&pagename={{FULLPAGENAMEE}}&type=1&template=Strain_info_table edit table]</div> ||
|}
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.30856.J5b510808c711a--></protect>


==Notes==


==Phenotype Annotation==
<protect><!--box uid=d41d8cd98f00b204e9800998ecf8427e.30856.M5b510808c807f-->
<!--
******************************************************************************************
* 
** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** 
* 
****************************************************************************************** -->
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="M5b510808c807f"  class=" tableEdit OMP_annotation_table dataTable"  
|- align='left' bgcolor='#CCCCFF'
!|Annotation ID!!Qualifier!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
|- 
|
OMP_AN:33962
|

|
OMP:0007879
|
decreased resistance to an antimicrobial agent
|
Relative to: OMP_AN:27550

<hr>Genotype differences:<br>
+lacZ4787(del)( +recG756(del)  -lacZ4787(del)
<hr>Condition differences:<br>
no differences
|

*temperature:37C
*medium:LB agar
*medium:Ethidium Bromide
|
ECO:0007005
|
high throughput direct assay evidence used in manual assertion
|
PMID:21185072
|
towards some (CHEBI:4883) Ethidium Bromide
|

*chemical concentration=  50 ug/ml
*normalized fitness= -3.25 
|- 
|
OMP_AN:33963
|

|
OMP:0007377
|
decreased resistance to an alkylating agent
|
Relative to: OMP_AN:27502

<hr>Genotype differences:<br>
+lacZ4787(del)( +recG756(del)  -lacZ4787(del)
<hr>Condition differences:<br>
no differences
|

*temperature:37C
*medium:LB agar
*medium:methyl methanesulfonate (MMS)
|
ECO:0007005
|
high throughput direct assay evidence used in manual assertion
|
PMID:21185072
|
towards some (CHEBI:25255) methyl methanesulfonate (MMS)
|

*chemical concentration= 0.05%
*normalized fitness= -6.19 
|- 
|
OMP_AN:33964
|

|
OMP:0007879
|
decreased resistance to an antimicrobial agent
|
Relative to: OMP_AN:27503

<hr>Genotype differences:<br>
+lacZ4787(del)( +recG756(del)  -lacZ4787(del)
<hr>Condition differences:<br>
no differences
|

*temperature:37C
*medium:LB agar
*medium:Nitrofurantoin
|
ECO:0007005
|
high throughput direct assay evidence used in manual assertion
|
PMID:21185072
|
towards some (CHEBI:71415) Nitrofurantoin
|

*chemical concentration=  1.5 ug/ml
*normalized fitness= -4.53 
|- 
|
OMP_AN:33965
|

|
OMP:0006040
|
decreased resistance to quinolone
|
Relative to: OMP_AN:27543

<hr>Genotype differences:<br>
+lacZ4787(del)( +recG756(del)  -lacZ4787(del)
<hr>Condition differences:<br>
no differences
|

*temperature:37C
*medium:LB agar
*medium:Streptonigrin
|
ECO:0007005
|
high throughput direct assay evidence used in manual assertion
|
PMID:21185072
|
towards some (CHEBI:9287) Streptonigrin
|

*chemical concentration=  0.5 ug/ml
*normalized fitness= -4.64 
|- 
|
OMP_AN:33966
|

|
OMP:0006040
|
decreased resistance to quinolone
|
Relative to: OMP_AN:27539

<hr>Genotype differences:<br>
+lacZ4787(del)( +recG756(del)  -lacZ4787(del)
<hr>Condition differences:<br>
no differences
|

*temperature:37C
*medium:LB agar
*medium:Ciprofloxacin hydrochloride hydrate
|
ECO:0007005
|
high throughput direct assay evidence used in manual assertion
|
PMID:21185072
|
towards some (CHEBI:59936) Ciprofloxacin hydrochloride hydrate
|

*chemical concentration= 0.004 ug/ml
*normalized fitness= -6.02 

|- class="tableEdit_footer" 
|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.30856.M5b510808c807f&page=30856&pagename={{FULLPAGENAMEE}}&type=0&template=OMP_annotation_table edit table]</div> || || || || || || || || || ||
|}
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.30856.M5b510808c807f--></protect>


==Additional Information==


==Links==


==References==
{{RefHelp}}<references/>