View source for OMP ST:72653 ! Escherichia coli K-12 JW2220

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==Strain Summary==
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!align=left align='left' bgcolor='#CCCCFF' |Strain Name
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Escherichia coli K-12 JW2220
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!align=left align='left' bgcolor='#CCCCFF' |Synonyms
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JW2220-1
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!align=left align='left' bgcolor='#CCCCFF' |Taxon Information
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*Pangenome: Escherichia coli
*Subspecies and/or strain: K-12
*NCBI Taxonomy ID: [http://www.ncbi.nlm.nih.gov/taxonomy?term=83333 83333]
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!align=left align='left' bgcolor='#CCCCFF' |Genotype
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DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 yfaQ780(del)::FRT-kan-FRT
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!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
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*PMID:16738554
*[http://cgsc2.biology.yale.edu/Strain.php?ID=108072 Coli Genetic Stock Center]
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!align=left align='left' bgcolor='#CCCCFF' |Strain availability
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[http://cgsc2.biology.yale.edu/Strain.php?ID=108072 Coli Genetic Stock Center]
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!align=left align='left' bgcolor='#CCCCFF' |Ancestry
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parent: [[OMP ST:800 ! Escherichia coli K-12 BW25113]]
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!align=left align='left' bgcolor='#CCCCFF' |Annotated phenotypes
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==Notes==


==Phenotype Annotation==
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!|Annotation ID!!Qualifier!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
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OMP_AN:31261
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OMP:0007878
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increased resistance to an antimicrobial agent
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Relative to: OMP_AN:27559

<hr>Genotype differences:<br>
+lacZ4787(del)( +yfaQ780(del)  -lacZ4787(del)
<hr>Condition differences:<br>
no differences
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*temperature:37C
*medium:LB agar
*medium:Actinomycin D
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ECO:0007005
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high throughput direct assay evidence used in manual assertion
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PMID:21185072
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towards some (CHEBI:27666 CID:457193) Actinomycin D
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*chemical concentration= 2.5 ug/ml
*normalized fitness= 3.34 
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OMP_AN:31262
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OMP:0007912
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decreased resistance to a chelator
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Relative to: OMP_AN:27507

<hr>Genotype differences:<br>
+lacZ4787(del)( +yfaQ780(del)  -lacZ4787(del)
<hr>Condition differences:<br>
no differences
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*temperature:37C
*medium:LB agar
*medium:EDTA disodium salt dihydrate
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ECO:0007005
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high throughput direct assay evidence used in manual assertion
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PMID:21185072
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towards some (CHEBI:64758) EDTA disodium salt dihydrate
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*chemical concentration= 0.1 mM
*normalized fitness= -3.29 
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OMP_AN:31263
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OMP:0007250
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increased resistance to a chemical
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Relative to: OMP_AN:27574

<hr>Genotype differences:<br>
+lacZ4787(del)( +yfaQ780(del)  -lacZ4787(del)
<hr>Condition differences:<br>
no differences
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*temperature:37C
*medium:LB agar
*medium:Paraquat dichloride
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ECO:0007005
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high throughput direct assay evidence used in manual assertion
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PMID:21185072
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towards some (CHEBI:28786) Paraquat dichloride
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*chemical concentration=  5 uM
*normalized fitness= 3.49 

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==Additional Information==


==Links==


==References==
{{RefHelp}}<references/>