View source for OMP ST:72600 ! Escherichia coli K-12 JW2145

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==Strain Summary==
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!align=left align='left' bgcolor='#CCCCFF' |Strain Name
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Escherichia coli K-12 JW2145
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!align=left align='left' bgcolor='#CCCCFF' |Synonyms
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JW2145-1
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!align=left align='left' bgcolor='#CCCCFF' |Taxon Information
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*Pangenome: Escherichia coli
*Subspecies and/or strain: K-12
*NCBI Taxonomy ID: [http://www.ncbi.nlm.nih.gov/taxonomy?term=83333 83333]
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!align=left align='left' bgcolor='#CCCCFF' |Genotype
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DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 yeiH785(del)::FRT-kan-FRT
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!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
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*PMID:16738554
*[http://cgsc2.biology.yale.edu/Strain.php?ID=108020 Coli Genetic Stock Center]
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!align=left align='left' bgcolor='#CCCCFF' |Strain availability
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[http://cgsc2.biology.yale.edu/Strain.php?ID=108020 Coli Genetic Stock Center]
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!align=left align='left' bgcolor='#CCCCFF' |Ancestry
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parent: [[OMP ST:800 ! Escherichia coli K-12 BW25113]]
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!align=left align='left' bgcolor='#CCCCFF' |Annotated phenotypes
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==Notes==


==Phenotype Annotation==
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!|Annotation ID!!Qualifier!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
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OMP_AN:31180
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OMP:0007896
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decreased resistance to a surfactant
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Relative to: OMP_AN:27581

<hr>Genotype differences:<br>
+lacZ4787(del)( +yeiH785(del)  -lacZ4787(del)
<hr>Condition differences:<br>
no differences
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*temperature:37C
*medium:LB agar
*medium:Benzalkonium chloride
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ECO:0007005
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high throughput direct assay evidence used in manual assertion
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PMID:21185072
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towards some (CHEBI:3020) Benzalkonium chloride
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*chemical concentration=  10 ug/ml
*normalized fitness= -3.63 
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OMP_AN:31181
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OMP:0007902
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increased resistance to bile acids
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Relative to: OMP_AN:27585

<hr>Genotype differences:<br>
+lacZ4787(del)( +yeiH785(del)  -lacZ4787(del)
<hr>Condition differences:<br>
no differences
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*temperature:37C
*medium:LB agar
*medium:Cholate sodium hydrate
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ECO:0007005
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high throughput direct assay evidence used in manual assertion
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PMID:21185072
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towards some (CID:23679061) Cholate sodium hydrate
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*chemical concentration= 0.1 %
*normalized fitness= 4.5 
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OMP_AN:31182
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OMP:0007521
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decreased population growth in high osmolarity
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Relative to: OMP_AN:27595

<hr>Genotype differences:<br>
+lacZ4787(del)( +yeiH785(del)  -lacZ4787(del)
<hr>Condition differences:<br>
no differences
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*temperature:37C
*medium:LB agar
*medium:NaCl
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ECO:0007005
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high throughput direct assay evidence used in manual assertion
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PMID:21185072
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towards some (CHEBI:26710) NaCl
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*chemical concentration= 150 mM
*normalized fitness= -3.84 

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==Additional Information==


==Links==


==References==
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