View source for OMP ST:6122 ! Escherichia coli K-12 JW3597

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==Strain Summary==
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!align=left align='left' bgcolor='#CCCCFF' |Strain Name
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Escherichia coli K-12 JW3597
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!align=left align='left' bgcolor='#CCCCFF' |Synonyms
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JW3597-1
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!align=left align='left' bgcolor='#CCCCFF' |Taxon Information
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*Pangenome: Escherichia coli
*Subspecies and/or strain: K-12
*NCBI Taxonomy ID: [http://www.ncbi.nlm.nih.gov/taxonomy?term=83333 83333]
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!align=left align='left' bgcolor='#CCCCFF' |Genotype
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DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 rfaL734(del)::kan
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!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
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[http://cgsc.biology.yale.edu/Strain.php?ID=108930 Coli Genetic Stock Center]
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!align=left align='left' bgcolor='#CCCCFF' |Strain availability
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[http://cgsc.biology.yale.edu/Strain.php?ID=108930 Coli Genetic Stock Center]
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!align=left align='left' bgcolor='#CCCCFF' |Ancestry
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parent:OMP ST:800 ! Escherichia coli K-12 BW25113
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!align=left align='left' bgcolor='#CCCCFF' |Annotated phenotypes
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==Notes==


==Phenotype Annotation==
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!|Annotation ID!!Qualifier!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
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OMP_AN:1184
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OMP:0005323
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altered cell motility by swarming
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Relative to: OMP_AN:881

<hr>Genotype differences:<br>
+DE(araD-araB)567 +DE(rhaD-rhaB)568 +hsdR514 +lacZ4787(del)( +rfaL734(del)  -IN(rrnD-rrnE)1
<hr>Condition differences:<br>
no differences
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*temperature:33C
*medium:swarming motility medium
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ECO:0005803
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motility assay evidence
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PMID:17122336
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OMP_AN:33814
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OMP:0007879
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decreased resistance to an antimicrobial agent
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Relative to: OMP_AN:27591

<hr>Genotype differences:<br>
+lacZ4787(del)( +rfaL734(del)  -lacZ4787(del)
<hr>Condition differences:<br>
no differences
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*temperature:37C
*medium:LB agar
*medium:Trimethoprim (CHEBI:45924)  + Sulfamethizole (CHEBI:9331)
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ECO:0007005
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high throughput direct assay evidence used in manual assertion
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PMID:21185072
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towards some (CHEBI:45924 + CHEBI:9331) Trimethoprim (CHEBI:45924)  + Sulfamethizole (CHEBI:9331)
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*chemical concentration= 0.1 + 50 ug/ml
*normalized fitness= -5.58 

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==Additional Information==


==Links==


==References==
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