View source for OMP ST:430 ! Escherichia coli K-12 RP487

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==Strain Summary==
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!align=left align='left' bgcolor='#CCCCFF' |Strain Name
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Escherichia coli K-12 RP487
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!align=left align='left' bgcolor='#CCCCFF' |Synonyms
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RP477 metF
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!align=left align='left' bgcolor='#CCCCFF' |Taxon Information
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*Pangenome: Escherichia coli
*Subspecies and/or strain: K-12
*NCBI Taxonomy ID: [http://www.ncbi.nlm.nih.gov/taxonomy?term=83333 83333]
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!align=left align='left' bgcolor='#CCCCFF' |Genotype
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F- thr leu his metF DE(gal-attLambda) eda strA
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!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
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PMID:365356
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!align=left align='left' bgcolor='#CCCCFF' |Strain availability
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!align=left align='left' bgcolor='#CCCCFF' |Ancestry
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!align=left align='left' bgcolor='#CCCCFF' |Annotated phenotypes
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==Notes==


==Phenotype Annotation==
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!|Annotation ID!!not!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
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OMP_AN:429
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Reversing flagella rotation 
|

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Relative to: 

<hr>Genotype differences:<br>
Nothing to compare<br/>
<hr>Condition differences:<br>
Nothing to compare<br/>
|
*temperature:35C
*medium:motility buffer
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ECO:0000181
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in vitro assay evidence
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PMID:365356
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Tethering assay  
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OMP_AN:436
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OMP:0000053
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presence of negative chemotaxis
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Relative to: 

<hr>Genotype differences:<br>
Nothing to compare<br/>
<hr>Condition differences:<br>
Nothing to compare<br/>
|
*temperature:35C
*medium:leucine (10^-2 M)
*medium:motility buffer
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ECO:0000181
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in vitro assay evidence
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PMID:365356
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CHEBI:25017 leucine
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Tethering assay 
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OMP_AN:437
|

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OMP:0000053
|
presence of negative chemotaxis
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Relative to: 

<hr>Genotype differences:<br>
Nothing to compare<br/>
<hr>Condition differences:<br>
Nothing to compare<br/>
|
*temperature:35C
*medium:acetate (10^-2 M)
*medium:motility buffer
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ECO:0000181
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in vitro assay evidence
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PMID:365356
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CHEBI:30089 acetate
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Tethering assay 
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OMP_AN:438
|

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OMP:0000053
|
presence of negative chemotaxis
|
Relative to: 

<hr>Genotype differences:<br>
Nothing to compare<br/>
<hr>Condition differences:<br>
Nothing to compare<br/>
|
*temperature:35C
*medium:motility buffer
*medium:salicylate (10^-3 M)
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ECO:0000181
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in vitro assay evidence
|
PMID:365356
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CHEBI:30762 salicylate
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Tethering assay 
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OMP_AN:439
|

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OMP:0000053
|
presence of negative chemotaxis
|
Relative to: 

<hr>Genotype differences:<br>
Nothing to compare<br/>
<hr>Condition differences:<br>
Nothing to compare<br/>
|
*temperature:35C
*medium:indole (2.5 x 10^-4 M)
*medium:motility buffer
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ECO:0000181
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in vitro assay evidence
|
PMID:365356
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CHEBI:35581 indole
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Tethering assay 
|- 
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OMP_AN:440
|

|
OMP:0000053
|
presence of negative chemotaxis
|
Relative to: 

<hr>Genotype differences:<br>
Nothing to compare<br/>
<hr>Condition differences:<br>
Nothing to compare<br/>
|
*temperature:35C
*medium:Co++ (10^-4 M)
*medium:motility buffer
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ECO:0000181
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in vitro assay evidence
|
PMID:365356
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CHEBI:48828 Co++
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Tethering assay 
|- 
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OMP_AN:471
|

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OMP:0000052
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presence of positive chemotaxis
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Relative to: 

<hr>Genotype differences:<br>
Nothing to compare<br/>
<hr>Condition differences:<br>
Nothing to compare<br/>
|
*temperature:35C
*medium:aspartate
*medium:motility buffer
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ECO:0000181
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in vitro assay evidence
|
PMID:365356
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CHEBI:17053 aspartate
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Tethering assay
Decreased aspartate concentration 10^-5 M -> 0 M
 
|- 
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OMP_AN:472
|

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OMP:0000052
|
presence of positive chemotaxis
|
Relative to: 

<hr>Genotype differences:<br>
Nothing to compare<br/>
<hr>Condition differences:<br>
Nothing to compare<br/>
|
*temperature:35C
*medium:motility buffer
*medium:serine
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ECO:0000181
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in vitro assay evidence
|
PMID:365356
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CHEBI:17822 serine
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Tethering assay
Decreased serine concentration 10^-5 M -> 0 M 
|- 
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OMP_AN:539
|

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OMP:0000052
|
presence of positive chemotaxis
|
Relative to: 

<hr>Genotype differences:<br>
Nothing to compare<br/>
<hr>Condition differences:<br>
Nothing to compare<br/>
|
*temperature:35C
*medium:motility medium
*medium:phenol (5 mM)
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ECO:0000181
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in vitro assay evidence
|
PMID:3025180
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CHEBI:15882 phenol
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Need to check phenotype 

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==Additional Information==


==Links==


==References==
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