View source for OMP ST:1033 ! Escherichia coli K-12 JW3770

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==Strain Summary==
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!align=left align='left' bgcolor='#CCCCFF' |Strain Name
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Escherichia coli K-12 JW3770
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!align=left align='left' bgcolor='#CCCCFF' |Synonyms
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JW3770-1
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!align=left align='left' bgcolor='#CCCCFF' |Taxon Information
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*Pangenome: Escherichia coli
*Subspecies and/or strain: K-12
*NCBI Taxonomy ID: [http://www.ncbi.nlm.nih.gov/taxonomy?term=83333 83333]
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!align=left align='left' bgcolor='#CCCCFF' |Genotype
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DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 rffM745(del)::kan
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!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
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[http://cgsc.biology.yale.edu/Strain.php?ID=109026 Coli Genetic Stock Center]
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!align=left align='left' bgcolor='#CCCCFF' |Strain availability
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[http://cgsc.biology.yale.edu/Strain.php?ID=109026 Coli Genetic Stock Center]
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!align=left align='left' bgcolor='#CCCCFF' |Ancestry
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parent:OMP ST:800 ! Escherichia coli K-12 BW25113
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!align=left align='left' bgcolor='#CCCCFF' |Annotated phenotypes
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==Notes==


==Phenotype Annotation==
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!|Annotation ID!!Qualifier!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
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OMP_AN:945
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OMP:0007092
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decreased cell motility by swarming
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Relative to: OMP_AN:881

<hr>Genotype differences:<br>
+DE(araD-araB)567 +DE(rhaD-rhaB)568 +hsdR514 +lacZ4787(del)( +rffM745(del)  -IN(rrnD-rrnE)1
<hr>Condition differences:<br>
no differences
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*temperature:33C
*medium:swarming motility medium
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ECO:0005803
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motility assay evidence
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PMID:17122336
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OMP_AN:1139
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OMP:0005324
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altered cell motility by swimming
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Relative to: OMP_AN:882

<hr>Genotype differences:<br>
+DE(araD-araB)567 +DE(rhaD-rhaB)568 +hsdR514 +lacZ4787(del)( +rffM745(del)  -IN(rrnD-rrnE)1
<hr>Condition differences:<br>
no differences
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*temperature:33C
*medium:swimming motility medium
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ECO:0005803
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motility assay evidence
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PMID:17122336
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OMP_AN:34322
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OMP:0006044
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decreased resistance to beta-lactam
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Relative to: OMP_AN:27535

<hr>Genotype differences:<br>
+lacZ4787(del)( +rffM745(del)  -lacZ4787(del)
<hr>Condition differences:<br>
no differences
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*temperature:37C
*medium:LB agar
*medium:Cefsulodin sodium salt hydrate
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ECO:0007005
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high throughput direct assay evidence used in manual assertion
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PMID:21185072
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towards some (CHEBI:31380) Cefsulodin sodium salt hydrate
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*chemical concentration=  18 ug/ml
*normalized fitness= -3.76 
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OMP_AN:34323
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OMP:0007878
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increased resistance to an antimicrobial agent
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Relative to: OMP_AN:27566

<hr>Genotype differences:<br>
+lacZ4787(del)( +rffM745(del)  -lacZ4787(del)
<hr>Condition differences:<br>
no differences
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*temperature:37C
*medium:LB agar
*medium:Vancomycin HCl hydrate
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ECO:0007005
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high throughput direct assay evidence used in manual assertion
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PMID:21185072
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towards some (CHEBI:9932) Vancomycin HCl hydrate
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*chemical concentration=  50 ug/ml
*normalized fitness= 4.44 
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OMP_AN:34324
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OMP:0007520
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increased population growth in high osmolarity
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Relative to: OMP_AN:27595

<hr>Genotype differences:<br>
+lacZ4787(del)( +rffM745(del)  -lacZ4787(del)
<hr>Condition differences:<br>
no differences
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*temperature:37C
*medium:LB agar
*medium:NaCl
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ECO:0007005
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high throughput direct assay evidence used in manual assertion
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PMID:21185072
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towards some (CHEBI:26710) NaCl
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*chemical concentration=  600 mM
*normalized fitness= 5.33 

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==Additional Information==


==Links==


==References==
{{RefHelp}}<references/>