View source for OMP ID format

modified from original googledoc:

https://docs.google.com/document/d/1N3PQM4Prar9aZn5NlJCZJ0rCx7w_G_s2IbIBYXl8CO0/edit#heading=h.whbibz64jbk9

==Prefixes==
<protect><!--box uid=d41d8cd98f00b204e9800998ecf8427e.4329.Z5397844d6822c-->
<!--
******************************************************************************************
* 
*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** 
* 
****************************************************************************************** -->
{|   id="Z5397844d6822c"  class=" tableEdit "  

|-
!align=left  |Pan-genome
||
OMP_PG: vs OMP_PGM vs ?
||
Jim and Michelle suggested OMP_TX (for taxon) or OMP_SP (for species)
|-
!align=left  |Pan-gene
||
OMP_GN: vs OMP_PGN vs ?
||

|-
!align=left  |Strain/Substrain
||
OMP_ST: vs OMP_STR vs ?
||

|-
!align=left  |Allele
||
OMP_AL: vs OMP_ALL vs ?
||

|-
!align=left  |Phenotype Annotation
||
OMP_AN: vs. OMP_ANN vs ?
||


|- class="tableEdit_footer" 
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.4329.Z5397844d6822c&page=4329&pagename={{FULLPAGENAMEE}}&type=1&template= edit table]</span> || ||
|}
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.4329.Z5397844d6822c--></protect>

==Term ID numbers==
Decided to not use leading zeros 

==Pangenome==
*Includes only the genomes of strains.
*Includes 3 different categories:
**1. core genome: genes present in all strains
**2. Dispensable genome: genes present in two or more strains
**3. Unique genes: specific to single strains


==Strains and sub-strains==
* In ecoli wiki the prefix for all strains and their derivatives is “strain:” Should we just omit this prefix in OMP?
**Examples:

OMP_ST:00004 ! K-12	vs.	OMP_ST:00004 ! Strain:K-12
		 
OMP_ST:00062 ! MG1655	vs.	OMP_ST:00062 ! Strain:MG1655


* Should we make the distinction between a strain and its derivatives?

OMP_ST:00004 ! K-12

OMP_ST:00062 ! K-12_MG1655	vs.	OMP_ST:00062 ! MG1655 


*E.coli_K-12_MG1655
*We will have our own unique ID’s and cross ref with NCBI