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		<id>https://microbialphenotypes.org/wiki/index.php?title=PMID:16385049&amp;diff=18280</id>
		<title>PMID:16385049</title>
		<link rel="alternate" type="text/html" href="https://microbialphenotypes.org/wiki/index.php?title=PMID:16385049&amp;diff=18280"/>
		<updated>2015-12-18T05:22:08Z</updated>

		<summary type="html">&lt;p&gt;69.30.234.186: Fill PMID: Page!&lt;/p&gt;
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{|   id=&amp;quot;Z567398003b4f7&amp;quot;  class=&amp;quot; tableEdit PMID_info_table&amp;quot;  &lt;br /&gt;
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!align=left align='left' bgcolor='#CCCCFF' |Citation&lt;br /&gt;
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'''Herzberg, M, Kaye, IK, Peti, W and Wood, TK'''  (2006) YdgG (TqsA) controls biofilm formation in Escherichia coli K-12 through autoinducer 2 transport. ''J. Bacteriol.'' '''188''':587-98&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Abstract&lt;br /&gt;
||&lt;br /&gt;
YdgG is an uncharacterized protein that is induced in Escherichia coli biofilms. Here it is shown that deletion of ydgG decreased extracellular and increased intracellular concentrations of autoinducer 2 (AI-2); hence, YdgG enhances transport of AI-2. Consistent with this hypothesis, deletion of ydgG resulted in a 7,000-fold increase in biofilm thickness and 574-fold increase in biomass in flow cells. Also consistent with the hypothesis, deletion of ydgG increased cell motility by increasing transcription of flagellar genes (genes induced by AI-2). By expressing ydgG in trans, the wild-type phenotypes for extracellular AI-2 activity, motility, and biofilm formation were restored. YdgG is also predicted to be a membrane-spanning protein that is conserved in many bacteria, and it influences resistance to several antimicrobials, including crystal violet and streptomycin (this phenotype could also be complemented). Deletion of ydgG also caused 31% of the bacterial chromosome to be differentially expressed in biofilms, as expected, since AI-2 controls hundreds of genes. YdgG was found to negatively modulate expression of flagellum- and motility-related genes, as well as other known products essential for biofilm formation, including operons for type 1 fimbriae, autotransporter protein Ag43, curli production, colanic acid production, and production of polysaccharide adhesin. Eighty genes not previously related to biofilm formation were also identified, including those that encode transport proteins (yihN and yihP), polysialic acid production (gutM and gutQ), CP4-57 prophage functions (yfjR and alpA), methionine biosynthesis (metR), biotin and thiamine biosynthesis (bioF and thiDFH), anaerobic metabolism (focB, hyfACDR, ttdA, and fumB), and proteins with unknown function (ybfG, yceO, yjhQ, and yjbE); 10 of these genes were verified through mutation to decrease biofilm formation by 40% or more (yfjR, bioF, yccW, yjbE, yceO, ttdA, fumB, yjiP, gutQ, and yihR). Hence, it appears YdgG controls the transport of the quorum-sensing signal AI-2, and so we suggest the gene name tqsA.&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Links&lt;br /&gt;
||&lt;br /&gt;
[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;amp;db=pubmed&amp;amp;dopt=Abstract&amp;amp;list_uids=16385049 PubMed] [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1347309 PMC1347309]&lt;br /&gt;
Online version:[http://dx.doi.org/10.1128/JB.188.2.587-598.2006 10.1128/JB.188.2.587-598.2006]&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Keywords&lt;br /&gt;
||&lt;br /&gt;
Biofilms/growth &amp;amp; development; Biological Transport/genetics; Escherichia coli K12/physiology; Escherichia coli Proteins/genetics; Escherichia coli Proteins/physiology; Gene Deletion; Genes, Bacterial/genetics; Homoserine/analogs &amp;amp; derivatives; Homoserine/metabolism; Lactones/metabolism; Transcription, Genetic&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
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|}&lt;br /&gt;
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&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.542.Z567398003b4f7--&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Main Points of the Paper ==&lt;br /&gt;
{{LitSignificance}}&lt;br /&gt;
&lt;br /&gt;
== Materials and Methods Used ==&lt;br /&gt;
{{LitMaterials}}&lt;br /&gt;
&lt;br /&gt;
==Phenotype Annotations==&lt;br /&gt;
{{AnnotationTableHelp}}&lt;br /&gt;
&amp;lt;protect&amp;gt;&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.542.K567398004223d--&amp;gt;&lt;br /&gt;
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*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** &lt;br /&gt;
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{| border=&amp;quot;2&amp;quot; cellpadding=&amp;quot;4&amp;quot; cellspacing=&amp;quot;0&amp;quot; style=&amp;quot;margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;&amp;quot;  id=&amp;quot;K567398004223d&amp;quot;  class=&amp;quot; tableEdit Phenotype_Table_2&amp;quot;  &lt;br /&gt;
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!|Phenotype of!!Taxon Information!!Genotype Information (if known)!!Condition Information!!OMP ID!!OMP Term Name!!ECO ID!!ECO Term Name!!Notes!!Status&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
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|}&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
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&lt;br /&gt;
==Notes==&lt;br /&gt;
&lt;br /&gt;
==References==&lt;br /&gt;
{{RefHelp}}&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Publication]]&lt;/div&gt;</summary>
		<author><name>69.30.234.186</name></author>
		
	</entry>
	<entry>
		<id>https://microbialphenotypes.org/wiki/index.php?title=PMID:16385049&amp;diff=18279</id>
		<title>PMID:16385049</title>
		<link rel="alternate" type="text/html" href="https://microbialphenotypes.org/wiki/index.php?title=PMID:16385049&amp;diff=18279"/>
		<updated>2015-12-18T05:21:46Z</updated>

		<summary type="html">&lt;p&gt;69.30.234.186: Fill PMID: Page!&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{RightTOC}}&lt;br /&gt;
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*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** &lt;br /&gt;
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{|   id=&amp;quot;W567397e9e03a0&amp;quot;  class=&amp;quot; tableEdit PMID_info_table&amp;quot;  &lt;br /&gt;
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|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Citation&lt;br /&gt;
||&lt;br /&gt;
'''Herzberg, M, Kaye, IK, Peti, W and Wood, TK'''  (2006) YdgG (TqsA) controls biofilm formation in Escherichia coli K-12 through autoinducer 2 transport. ''J. Bacteriol.'' '''188''':587-98&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Abstract&lt;br /&gt;
||&lt;br /&gt;
YdgG is an uncharacterized protein that is induced in Escherichia coli biofilms. Here it is shown that deletion of ydgG decreased extracellular and increased intracellular concentrations of autoinducer 2 (AI-2); hence, YdgG enhances transport of AI-2. Consistent with this hypothesis, deletion of ydgG resulted in a 7,000-fold increase in biofilm thickness and 574-fold increase in biomass in flow cells. Also consistent with the hypothesis, deletion of ydgG increased cell motility by increasing transcription of flagellar genes (genes induced by AI-2). By expressing ydgG in trans, the wild-type phenotypes for extracellular AI-2 activity, motility, and biofilm formation were restored. YdgG is also predicted to be a membrane-spanning protein that is conserved in many bacteria, and it influences resistance to several antimicrobials, including crystal violet and streptomycin (this phenotype could also be complemented). Deletion of ydgG also caused 31% of the bacterial chromosome to be differentially expressed in biofilms, as expected, since AI-2 controls hundreds of genes. YdgG was found to negatively modulate expression of flagellum- and motility-related genes, as well as other known products essential for biofilm formation, including operons for type 1 fimbriae, autotransporter protein Ag43, curli production, colanic acid production, and production of polysaccharide adhesin. Eighty genes not previously related to biofilm formation were also identified, including those that encode transport proteins (yihN and yihP), polysialic acid production (gutM and gutQ), CP4-57 prophage functions (yfjR and alpA), methionine biosynthesis (metR), biotin and thiamine biosynthesis (bioF and thiDFH), anaerobic metabolism (focB, hyfACDR, ttdA, and fumB), and proteins with unknown function (ybfG, yceO, yjhQ, and yjbE); 10 of these genes were verified through mutation to decrease biofilm formation by 40% or more (yfjR, bioF, yccW, yjbE, yceO, ttdA, fumB, yjiP, gutQ, and yihR). Hence, it appears YdgG controls the transport of the quorum-sensing signal AI-2, and so we suggest the gene name tqsA.&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Links&lt;br /&gt;
||&lt;br /&gt;
[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;amp;db=pubmed&amp;amp;dopt=Abstract&amp;amp;list_uids=16385049 PubMed] [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1347309 PMC1347309]&lt;br /&gt;
Online version:[http://dx.doi.org/10.1128/JB.188.2.587-598.2006 10.1128/JB.188.2.587-598.2006]&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Keywords&lt;br /&gt;
||&lt;br /&gt;
Biofilms/growth &amp;amp; development; Biological Transport/genetics; Escherichia coli K12/physiology; Escherichia coli Proteins/genetics; Escherichia coli Proteins/physiology; Gene Deletion; Genes, Bacterial/genetics; Homoserine/analogs &amp;amp; derivatives; Homoserine/metabolism; Lactones/metabolism; Transcription, Genetic&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.542.W567397e9e03a0&amp;amp;page=542&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=1&amp;amp;template=PMID_info_table edit table]&amp;lt;/div&amp;gt; ||&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.542.W567397e9e03a0--&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Main Points of the Paper ==&lt;br /&gt;
{{LitSignificance}}&lt;br /&gt;
&lt;br /&gt;
== Materials and Methods Used ==&lt;br /&gt;
{{LitMaterials}}&lt;br /&gt;
&lt;br /&gt;
==Phenotype Annotations==&lt;br /&gt;
{{AnnotationTableHelp}}&lt;br /&gt;
&amp;lt;protect&amp;gt;&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.542.U567397e9e70d7--&amp;gt;&lt;br /&gt;
&amp;lt;!--&lt;br /&gt;
******************************************************************************************&lt;br /&gt;
* &lt;br /&gt;
*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** &lt;br /&gt;
* &lt;br /&gt;
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{| border=&amp;quot;2&amp;quot; cellpadding=&amp;quot;4&amp;quot; cellspacing=&amp;quot;0&amp;quot; style=&amp;quot;margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;&amp;quot;  id=&amp;quot;U567397e9e70d7&amp;quot;  class=&amp;quot; tableEdit Phenotype_Table_2&amp;quot;  &lt;br /&gt;
|- align='left' bgcolor='#CCCCFF'&lt;br /&gt;
!|Phenotype of!!Taxon Information!!Genotype Information (if known)!!Condition Information!!OMP ID!!OMP Term Name!!ECO ID!!ECO Term Name!!Notes!!Status&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.542.U567397e9e70d7&amp;amp;page=542&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=0&amp;amp;template=Phenotype_Table_2 edit table]&amp;lt;/div&amp;gt; || || || || || || || || ||&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.542.U567397e9e70d7--&amp;gt;&amp;lt;/protect&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Notes==&lt;br /&gt;
&lt;br /&gt;
==References==&lt;br /&gt;
{{RefHelp}}&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Publication]]&lt;/div&gt;</summary>
		<author><name>69.30.234.186</name></author>
		
	</entry>
	<entry>
		<id>https://microbialphenotypes.org/wiki/index.php?title=PMID:16385049&amp;diff=18278</id>
		<title>PMID:16385049</title>
		<link rel="alternate" type="text/html" href="https://microbialphenotypes.org/wiki/index.php?title=PMID:16385049&amp;diff=18278"/>
		<updated>2015-12-18T05:21:24Z</updated>

		<summary type="html">&lt;p&gt;69.30.234.186: Fill PMID: Page!&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{RightTOC}}&lt;br /&gt;
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&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.542.D567397d4cb6ad--&amp;gt;&lt;br /&gt;
&amp;lt;!--&lt;br /&gt;
******************************************************************************************&lt;br /&gt;
* &lt;br /&gt;
*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** &lt;br /&gt;
* &lt;br /&gt;
****************************************************************************************** --&amp;gt;&lt;br /&gt;
{|   id=&amp;quot;D567397d4cb6ad&amp;quot;  class=&amp;quot; tableEdit PMID_info_table&amp;quot;  &lt;br /&gt;
&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Citation&lt;br /&gt;
||&lt;br /&gt;
'''Herzberg, M, Kaye, IK, Peti, W and Wood, TK'''  (2006) YdgG (TqsA) controls biofilm formation in Escherichia coli K-12 through autoinducer 2 transport. ''J. Bacteriol.'' '''188''':587-98&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Abstract&lt;br /&gt;
||&lt;br /&gt;
YdgG is an uncharacterized protein that is induced in Escherichia coli biofilms. Here it is shown that deletion of ydgG decreased extracellular and increased intracellular concentrations of autoinducer 2 (AI-2); hence, YdgG enhances transport of AI-2. Consistent with this hypothesis, deletion of ydgG resulted in a 7,000-fold increase in biofilm thickness and 574-fold increase in biomass in flow cells. Also consistent with the hypothesis, deletion of ydgG increased cell motility by increasing transcription of flagellar genes (genes induced by AI-2). By expressing ydgG in trans, the wild-type phenotypes for extracellular AI-2 activity, motility, and biofilm formation were restored. YdgG is also predicted to be a membrane-spanning protein that is conserved in many bacteria, and it influences resistance to several antimicrobials, including crystal violet and streptomycin (this phenotype could also be complemented). Deletion of ydgG also caused 31% of the bacterial chromosome to be differentially expressed in biofilms, as expected, since AI-2 controls hundreds of genes. YdgG was found to negatively modulate expression of flagellum- and motility-related genes, as well as other known products essential for biofilm formation, including operons for type 1 fimbriae, autotransporter protein Ag43, curli production, colanic acid production, and production of polysaccharide adhesin. Eighty genes not previously related to biofilm formation were also identified, including those that encode transport proteins (yihN and yihP), polysialic acid production (gutM and gutQ), CP4-57 prophage functions (yfjR and alpA), methionine biosynthesis (metR), biotin and thiamine biosynthesis (bioF and thiDFH), anaerobic metabolism (focB, hyfACDR, ttdA, and fumB), and proteins with unknown function (ybfG, yceO, yjhQ, and yjbE); 10 of these genes were verified through mutation to decrease biofilm formation by 40% or more (yfjR, bioF, yccW, yjbE, yceO, ttdA, fumB, yjiP, gutQ, and yihR). Hence, it appears YdgG controls the transport of the quorum-sensing signal AI-2, and so we suggest the gene name tqsA.&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Links&lt;br /&gt;
||&lt;br /&gt;
[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;amp;db=pubmed&amp;amp;dopt=Abstract&amp;amp;list_uids=16385049 PubMed] [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1347309 PMC1347309]&lt;br /&gt;
Online version:[http://dx.doi.org/10.1128/JB.188.2.587-598.2006 10.1128/JB.188.2.587-598.2006]&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Keywords&lt;br /&gt;
||&lt;br /&gt;
Biofilms/growth &amp;amp; development; Biological Transport/genetics; Escherichia coli K12/physiology; Escherichia coli Proteins/genetics; Escherichia coli Proteins/physiology; Gene Deletion; Genes, Bacterial/genetics; Homoserine/analogs &amp;amp; derivatives; Homoserine/metabolism; Lactones/metabolism; Transcription, Genetic&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.542.D567397d4cb6ad&amp;amp;page=542&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=1&amp;amp;template=PMID_info_table edit table]&amp;lt;/div&amp;gt; ||&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.542.D567397d4cb6ad--&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Main Points of the Paper ==&lt;br /&gt;
{{LitSignificance}}&lt;br /&gt;
&lt;br /&gt;
== Materials and Methods Used ==&lt;br /&gt;
{{LitMaterials}}&lt;br /&gt;
&lt;br /&gt;
==Phenotype Annotations==&lt;br /&gt;
{{AnnotationTableHelp}}&lt;br /&gt;
&amp;lt;protect&amp;gt;&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.542.Z567397d4d29fc--&amp;gt;&lt;br /&gt;
&amp;lt;!--&lt;br /&gt;
******************************************************************************************&lt;br /&gt;
* &lt;br /&gt;
*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** &lt;br /&gt;
* &lt;br /&gt;
****************************************************************************************** --&amp;gt;&lt;br /&gt;
{| border=&amp;quot;2&amp;quot; cellpadding=&amp;quot;4&amp;quot; cellspacing=&amp;quot;0&amp;quot; style=&amp;quot;margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;&amp;quot;  id=&amp;quot;Z567397d4d29fc&amp;quot;  class=&amp;quot; tableEdit Phenotype_Table_2&amp;quot;  &lt;br /&gt;
|- align='left' bgcolor='#CCCCFF'&lt;br /&gt;
!|Phenotype of!!Taxon Information!!Genotype Information (if known)!!Condition Information!!OMP ID!!OMP Term Name!!ECO ID!!ECO Term Name!!Notes!!Status&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.542.Z567397d4d29fc&amp;amp;page=542&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=0&amp;amp;template=Phenotype_Table_2 edit table]&amp;lt;/div&amp;gt; || || || || || || || || ||&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.542.Z567397d4d29fc--&amp;gt;&amp;lt;/protect&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Notes==&lt;br /&gt;
&lt;br /&gt;
==References==&lt;br /&gt;
{{RefHelp}}&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Publication]]&lt;/div&gt;</summary>
		<author><name>69.30.234.186</name></author>
		
	</entry>
	<entry>
		<id>https://microbialphenotypes.org/wiki/index.php?title=PMID:16385049&amp;diff=18277</id>
		<title>PMID:16385049</title>
		<link rel="alternate" type="text/html" href="https://microbialphenotypes.org/wiki/index.php?title=PMID:16385049&amp;diff=18277"/>
		<updated>2015-12-18T05:21:03Z</updated>

		<summary type="html">&lt;p&gt;69.30.234.186: Fill PMID: Page!&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{RightTOC}}&lt;br /&gt;
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* &lt;br /&gt;
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{|   id=&amp;quot;B567397bfb8f7c&amp;quot;  class=&amp;quot; tableEdit PMID_info_table&amp;quot;  &lt;br /&gt;
&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Citation&lt;br /&gt;
||&lt;br /&gt;
'''Herzberg, M, Kaye, IK, Peti, W and Wood, TK'''  (2006) YdgG (TqsA) controls biofilm formation in Escherichia coli K-12 through autoinducer 2 transport. ''J. Bacteriol.'' '''188''':587-98&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Abstract&lt;br /&gt;
||&lt;br /&gt;
YdgG is an uncharacterized protein that is induced in Escherichia coli biofilms. Here it is shown that deletion of ydgG decreased extracellular and increased intracellular concentrations of autoinducer 2 (AI-2); hence, YdgG enhances transport of AI-2. Consistent with this hypothesis, deletion of ydgG resulted in a 7,000-fold increase in biofilm thickness and 574-fold increase in biomass in flow cells. Also consistent with the hypothesis, deletion of ydgG increased cell motility by increasing transcription of flagellar genes (genes induced by AI-2). By expressing ydgG in trans, the wild-type phenotypes for extracellular AI-2 activity, motility, and biofilm formation were restored. YdgG is also predicted to be a membrane-spanning protein that is conserved in many bacteria, and it influences resistance to several antimicrobials, including crystal violet and streptomycin (this phenotype could also be complemented). Deletion of ydgG also caused 31% of the bacterial chromosome to be differentially expressed in biofilms, as expected, since AI-2 controls hundreds of genes. YdgG was found to negatively modulate expression of flagellum- and motility-related genes, as well as other known products essential for biofilm formation, including operons for type 1 fimbriae, autotransporter protein Ag43, curli production, colanic acid production, and production of polysaccharide adhesin. Eighty genes not previously related to biofilm formation were also identified, including those that encode transport proteins (yihN and yihP), polysialic acid production (gutM and gutQ), CP4-57 prophage functions (yfjR and alpA), methionine biosynthesis (metR), biotin and thiamine biosynthesis (bioF and thiDFH), anaerobic metabolism (focB, hyfACDR, ttdA, and fumB), and proteins with unknown function (ybfG, yceO, yjhQ, and yjbE); 10 of these genes were verified through mutation to decrease biofilm formation by 40% or more (yfjR, bioF, yccW, yjbE, yceO, ttdA, fumB, yjiP, gutQ, and yihR). Hence, it appears YdgG controls the transport of the quorum-sensing signal AI-2, and so we suggest the gene name tqsA.&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Links&lt;br /&gt;
||&lt;br /&gt;
[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;amp;db=pubmed&amp;amp;dopt=Abstract&amp;amp;list_uids=16385049 PubMed] [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1347309 PMC1347309]&lt;br /&gt;
Online version:[http://dx.doi.org/10.1128/JB.188.2.587-598.2006 10.1128/JB.188.2.587-598.2006]&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Keywords&lt;br /&gt;
||&lt;br /&gt;
Biofilms/growth &amp;amp; development; Biological Transport/genetics; Escherichia coli K12/physiology; Escherichia coli Proteins/genetics; Escherichia coli Proteins/physiology; Gene Deletion; Genes, Bacterial/genetics; Homoserine/analogs &amp;amp; derivatives; Homoserine/metabolism; Lactones/metabolism; Transcription, Genetic&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.542.B567397bfb8f7c&amp;amp;page=542&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=1&amp;amp;template=PMID_info_table edit table]&amp;lt;/div&amp;gt; ||&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.542.B567397bfb8f7c--&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Main Points of the Paper ==&lt;br /&gt;
{{LitSignificance}}&lt;br /&gt;
&lt;br /&gt;
== Materials and Methods Used ==&lt;br /&gt;
{{LitMaterials}}&lt;br /&gt;
&lt;br /&gt;
==Phenotype Annotations==&lt;br /&gt;
{{AnnotationTableHelp}}&lt;br /&gt;
&amp;lt;protect&amp;gt;&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.542.J567397bfca110--&amp;gt;&lt;br /&gt;
&amp;lt;!--&lt;br /&gt;
******************************************************************************************&lt;br /&gt;
* &lt;br /&gt;
*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** &lt;br /&gt;
* &lt;br /&gt;
****************************************************************************************** --&amp;gt;&lt;br /&gt;
{| border=&amp;quot;2&amp;quot; cellpadding=&amp;quot;4&amp;quot; cellspacing=&amp;quot;0&amp;quot; style=&amp;quot;margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;&amp;quot;  id=&amp;quot;J567397bfca110&amp;quot;  class=&amp;quot; tableEdit Phenotype_Table_2&amp;quot;  &lt;br /&gt;
|- align='left' bgcolor='#CCCCFF'&lt;br /&gt;
!|Phenotype of!!Taxon Information!!Genotype Information (if known)!!Condition Information!!OMP ID!!OMP Term Name!!ECO ID!!ECO Term Name!!Notes!!Status&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.542.J567397bfca110&amp;amp;page=542&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=0&amp;amp;template=Phenotype_Table_2 edit table]&amp;lt;/div&amp;gt; || || || || || || || || ||&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.542.J567397bfca110--&amp;gt;&amp;lt;/protect&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Notes==&lt;br /&gt;
&lt;br /&gt;
==References==&lt;br /&gt;
{{RefHelp}}&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Publication]]&lt;/div&gt;</summary>
		<author><name>69.30.234.186</name></author>
		
	</entry>
	<entry>
		<id>https://microbialphenotypes.org/wiki/index.php?title=PMID:16385049&amp;diff=18276</id>
		<title>PMID:16385049</title>
		<link rel="alternate" type="text/html" href="https://microbialphenotypes.org/wiki/index.php?title=PMID:16385049&amp;diff=18276"/>
		<updated>2015-12-18T05:20:42Z</updated>

		<summary type="html">&lt;p&gt;69.30.234.186: Fill PMID: Page!&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{RightTOC}}&lt;br /&gt;
&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.542.V567397aaae7b0--&amp;gt;&lt;br /&gt;
&amp;lt;!--&lt;br /&gt;
******************************************************************************************&lt;br /&gt;
* &lt;br /&gt;
*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** &lt;br /&gt;
* &lt;br /&gt;
****************************************************************************************** --&amp;gt;&lt;br /&gt;
{|   id=&amp;quot;V567397aaae7b0&amp;quot;  class=&amp;quot; tableEdit PMID_info_table&amp;quot;  &lt;br /&gt;
&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Citation&lt;br /&gt;
||&lt;br /&gt;
'''Herzberg, M, Kaye, IK, Peti, W and Wood, TK'''  (2006) YdgG (TqsA) controls biofilm formation in Escherichia coli K-12 through autoinducer 2 transport. ''J. Bacteriol.'' '''188''':587-98&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Abstract&lt;br /&gt;
||&lt;br /&gt;
YdgG is an uncharacterized protein that is induced in Escherichia coli biofilms. Here it is shown that deletion of ydgG decreased extracellular and increased intracellular concentrations of autoinducer 2 (AI-2); hence, YdgG enhances transport of AI-2. Consistent with this hypothesis, deletion of ydgG resulted in a 7,000-fold increase in biofilm thickness and 574-fold increase in biomass in flow cells. Also consistent with the hypothesis, deletion of ydgG increased cell motility by increasing transcription of flagellar genes (genes induced by AI-2). By expressing ydgG in trans, the wild-type phenotypes for extracellular AI-2 activity, motility, and biofilm formation were restored. YdgG is also predicted to be a membrane-spanning protein that is conserved in many bacteria, and it influences resistance to several antimicrobials, including crystal violet and streptomycin (this phenotype could also be complemented). Deletion of ydgG also caused 31% of the bacterial chromosome to be differentially expressed in biofilms, as expected, since AI-2 controls hundreds of genes. YdgG was found to negatively modulate expression of flagellum- and motility-related genes, as well as other known products essential for biofilm formation, including operons for type 1 fimbriae, autotransporter protein Ag43, curli production, colanic acid production, and production of polysaccharide adhesin. Eighty genes not previously related to biofilm formation were also identified, including those that encode transport proteins (yihN and yihP), polysialic acid production (gutM and gutQ), CP4-57 prophage functions (yfjR and alpA), methionine biosynthesis (metR), biotin and thiamine biosynthesis (bioF and thiDFH), anaerobic metabolism (focB, hyfACDR, ttdA, and fumB), and proteins with unknown function (ybfG, yceO, yjhQ, and yjbE); 10 of these genes were verified through mutation to decrease biofilm formation by 40% or more (yfjR, bioF, yccW, yjbE, yceO, ttdA, fumB, yjiP, gutQ, and yihR). Hence, it appears YdgG controls the transport of the quorum-sensing signal AI-2, and so we suggest the gene name tqsA.&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Links&lt;br /&gt;
||&lt;br /&gt;
[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;amp;db=pubmed&amp;amp;dopt=Abstract&amp;amp;list_uids=16385049 PubMed] [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1347309 PMC1347309]&lt;br /&gt;
Online version:[http://dx.doi.org/10.1128/JB.188.2.587-598.2006 10.1128/JB.188.2.587-598.2006]&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Keywords&lt;br /&gt;
||&lt;br /&gt;
Biofilms/growth &amp;amp; development; Biological Transport/genetics; Escherichia coli K12/physiology; Escherichia coli Proteins/genetics; Escherichia coli Proteins/physiology; Gene Deletion; Genes, Bacterial/genetics; Homoserine/analogs &amp;amp; derivatives; Homoserine/metabolism; Lactones/metabolism; Transcription, Genetic&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.542.V567397aaae7b0&amp;amp;page=542&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=1&amp;amp;template=PMID_info_table edit table]&amp;lt;/div&amp;gt; ||&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.542.V567397aaae7b0--&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Main Points of the Paper ==&lt;br /&gt;
{{LitSignificance}}&lt;br /&gt;
&lt;br /&gt;
== Materials and Methods Used ==&lt;br /&gt;
{{LitMaterials}}&lt;br /&gt;
&lt;br /&gt;
==Phenotype Annotations==&lt;br /&gt;
{{AnnotationTableHelp}}&lt;br /&gt;
&amp;lt;protect&amp;gt;&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.542.X567397aaba83b--&amp;gt;&lt;br /&gt;
&amp;lt;!--&lt;br /&gt;
******************************************************************************************&lt;br /&gt;
* &lt;br /&gt;
*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** &lt;br /&gt;
* &lt;br /&gt;
****************************************************************************************** --&amp;gt;&lt;br /&gt;
{| border=&amp;quot;2&amp;quot; cellpadding=&amp;quot;4&amp;quot; cellspacing=&amp;quot;0&amp;quot; style=&amp;quot;margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;&amp;quot;  id=&amp;quot;X567397aaba83b&amp;quot;  class=&amp;quot; tableEdit Phenotype_Table_2&amp;quot;  &lt;br /&gt;
|- align='left' bgcolor='#CCCCFF'&lt;br /&gt;
!|Phenotype of!!Taxon Information!!Genotype Information (if known)!!Condition Information!!OMP ID!!OMP Term Name!!ECO ID!!ECO Term Name!!Notes!!Status&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.542.X567397aaba83b&amp;amp;page=542&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=0&amp;amp;template=Phenotype_Table_2 edit table]&amp;lt;/div&amp;gt; || || || || || || || || ||&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.542.X567397aaba83b--&amp;gt;&amp;lt;/protect&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Notes==&lt;br /&gt;
&lt;br /&gt;
==References==&lt;br /&gt;
{{RefHelp}}&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Publication]]&lt;/div&gt;</summary>
		<author><name>69.30.234.186</name></author>
		
	</entry>
	<entry>
		<id>https://microbialphenotypes.org/wiki/index.php?title=PMID:16385049&amp;diff=18275</id>
		<title>PMID:16385049</title>
		<link rel="alternate" type="text/html" href="https://microbialphenotypes.org/wiki/index.php?title=PMID:16385049&amp;diff=18275"/>
		<updated>2015-12-18T05:20:20Z</updated>

		<summary type="html">&lt;p&gt;69.30.234.186: Fill PMID: Page!&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{RightTOC}}&lt;br /&gt;
&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.542.Z56739794b80df--&amp;gt;&lt;br /&gt;
&amp;lt;!--&lt;br /&gt;
******************************************************************************************&lt;br /&gt;
* &lt;br /&gt;
*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** &lt;br /&gt;
* &lt;br /&gt;
****************************************************************************************** --&amp;gt;&lt;br /&gt;
{|   id=&amp;quot;Z56739794b80df&amp;quot;  class=&amp;quot; tableEdit PMID_info_table&amp;quot;  &lt;br /&gt;
&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Citation&lt;br /&gt;
||&lt;br /&gt;
'''Herzberg, M, Kaye, IK, Peti, W and Wood, TK'''  (2006) YdgG (TqsA) controls biofilm formation in Escherichia coli K-12 through autoinducer 2 transport. ''J. Bacteriol.'' '''188''':587-98&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Abstract&lt;br /&gt;
||&lt;br /&gt;
YdgG is an uncharacterized protein that is induced in Escherichia coli biofilms. Here it is shown that deletion of ydgG decreased extracellular and increased intracellular concentrations of autoinducer 2 (AI-2); hence, YdgG enhances transport of AI-2. Consistent with this hypothesis, deletion of ydgG resulted in a 7,000-fold increase in biofilm thickness and 574-fold increase in biomass in flow cells. Also consistent with the hypothesis, deletion of ydgG increased cell motility by increasing transcription of flagellar genes (genes induced by AI-2). By expressing ydgG in trans, the wild-type phenotypes for extracellular AI-2 activity, motility, and biofilm formation were restored. YdgG is also predicted to be a membrane-spanning protein that is conserved in many bacteria, and it influences resistance to several antimicrobials, including crystal violet and streptomycin (this phenotype could also be complemented). Deletion of ydgG also caused 31% of the bacterial chromosome to be differentially expressed in biofilms, as expected, since AI-2 controls hundreds of genes. YdgG was found to negatively modulate expression of flagellum- and motility-related genes, as well as other known products essential for biofilm formation, including operons for type 1 fimbriae, autotransporter protein Ag43, curli production, colanic acid production, and production of polysaccharide adhesin. Eighty genes not previously related to biofilm formation were also identified, including those that encode transport proteins (yihN and yihP), polysialic acid production (gutM and gutQ), CP4-57 prophage functions (yfjR and alpA), methionine biosynthesis (metR), biotin and thiamine biosynthesis (bioF and thiDFH), anaerobic metabolism (focB, hyfACDR, ttdA, and fumB), and proteins with unknown function (ybfG, yceO, yjhQ, and yjbE); 10 of these genes were verified through mutation to decrease biofilm formation by 40% or more (yfjR, bioF, yccW, yjbE, yceO, ttdA, fumB, yjiP, gutQ, and yihR). Hence, it appears YdgG controls the transport of the quorum-sensing signal AI-2, and so we suggest the gene name tqsA.&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Links&lt;br /&gt;
||&lt;br /&gt;
[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;amp;db=pubmed&amp;amp;dopt=Abstract&amp;amp;list_uids=16385049 PubMed] [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1347309 PMC1347309]&lt;br /&gt;
Online version:[http://dx.doi.org/10.1128/JB.188.2.587-598.2006 10.1128/JB.188.2.587-598.2006]&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Keywords&lt;br /&gt;
||&lt;br /&gt;
Biofilms/growth &amp;amp; development; Biological Transport/genetics; Escherichia coli K12/physiology; Escherichia coli Proteins/genetics; Escherichia coli Proteins/physiology; Gene Deletion; Genes, Bacterial/genetics; Homoserine/analogs &amp;amp; derivatives; Homoserine/metabolism; Lactones/metabolism; Transcription, Genetic&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.542.Z56739794b80df&amp;amp;page=542&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=1&amp;amp;template=PMID_info_table edit table]&amp;lt;/div&amp;gt; ||&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.542.Z56739794b80df--&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Main Points of the Paper ==&lt;br /&gt;
{{LitSignificance}}&lt;br /&gt;
&lt;br /&gt;
== Materials and Methods Used ==&lt;br /&gt;
{{LitMaterials}}&lt;br /&gt;
&lt;br /&gt;
==Phenotype Annotations==&lt;br /&gt;
{{AnnotationTableHelp}}&lt;br /&gt;
&amp;lt;protect&amp;gt;&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.542.Q56739794c5cef--&amp;gt;&lt;br /&gt;
&amp;lt;!--&lt;br /&gt;
******************************************************************************************&lt;br /&gt;
* &lt;br /&gt;
*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** &lt;br /&gt;
* &lt;br /&gt;
****************************************************************************************** --&amp;gt;&lt;br /&gt;
{| border=&amp;quot;2&amp;quot; cellpadding=&amp;quot;4&amp;quot; cellspacing=&amp;quot;0&amp;quot; style=&amp;quot;margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;&amp;quot;  id=&amp;quot;Q56739794c5cef&amp;quot;  class=&amp;quot; tableEdit Phenotype_Table_2&amp;quot;  &lt;br /&gt;
|- align='left' bgcolor='#CCCCFF'&lt;br /&gt;
!|Phenotype of!!Taxon Information!!Genotype Information (if known)!!Condition Information!!OMP ID!!OMP Term Name!!ECO ID!!ECO Term Name!!Notes!!Status&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.542.Q56739794c5cef&amp;amp;page=542&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=0&amp;amp;template=Phenotype_Table_2 edit table]&amp;lt;/div&amp;gt; || || || || || || || || ||&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.542.Q56739794c5cef--&amp;gt;&amp;lt;/protect&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Notes==&lt;br /&gt;
&lt;br /&gt;
==References==&lt;br /&gt;
{{RefHelp}}&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Publication]]&lt;/div&gt;</summary>
		<author><name>69.30.234.186</name></author>
		
	</entry>
	<entry>
		<id>https://microbialphenotypes.org/wiki/index.php?title=PMID:16385049&amp;diff=18274</id>
		<title>PMID:16385049</title>
		<link rel="alternate" type="text/html" href="https://microbialphenotypes.org/wiki/index.php?title=PMID:16385049&amp;diff=18274"/>
		<updated>2015-12-18T05:19:59Z</updated>

		<summary type="html">&lt;p&gt;69.30.234.186: Fill PMID: Page!&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{RightTOC}}&lt;br /&gt;
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&amp;lt;!--&lt;br /&gt;
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* &lt;br /&gt;
*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** &lt;br /&gt;
* &lt;br /&gt;
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{|   id=&amp;quot;Q5673977fc8479&amp;quot;  class=&amp;quot; tableEdit PMID_info_table&amp;quot;  &lt;br /&gt;
&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Citation&lt;br /&gt;
||&lt;br /&gt;
'''Herzberg, M, Kaye, IK, Peti, W and Wood, TK'''  (2006) YdgG (TqsA) controls biofilm formation in Escherichia coli K-12 through autoinducer 2 transport. ''J. Bacteriol.'' '''188''':587-98&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Abstract&lt;br /&gt;
||&lt;br /&gt;
YdgG is an uncharacterized protein that is induced in Escherichia coli biofilms. Here it is shown that deletion of ydgG decreased extracellular and increased intracellular concentrations of autoinducer 2 (AI-2); hence, YdgG enhances transport of AI-2. Consistent with this hypothesis, deletion of ydgG resulted in a 7,000-fold increase in biofilm thickness and 574-fold increase in biomass in flow cells. Also consistent with the hypothesis, deletion of ydgG increased cell motility by increasing transcription of flagellar genes (genes induced by AI-2). By expressing ydgG in trans, the wild-type phenotypes for extracellular AI-2 activity, motility, and biofilm formation were restored. YdgG is also predicted to be a membrane-spanning protein that is conserved in many bacteria, and it influences resistance to several antimicrobials, including crystal violet and streptomycin (this phenotype could also be complemented). Deletion of ydgG also caused 31% of the bacterial chromosome to be differentially expressed in biofilms, as expected, since AI-2 controls hundreds of genes. YdgG was found to negatively modulate expression of flagellum- and motility-related genes, as well as other known products essential for biofilm formation, including operons for type 1 fimbriae, autotransporter protein Ag43, curli production, colanic acid production, and production of polysaccharide adhesin. Eighty genes not previously related to biofilm formation were also identified, including those that encode transport proteins (yihN and yihP), polysialic acid production (gutM and gutQ), CP4-57 prophage functions (yfjR and alpA), methionine biosynthesis (metR), biotin and thiamine biosynthesis (bioF and thiDFH), anaerobic metabolism (focB, hyfACDR, ttdA, and fumB), and proteins with unknown function (ybfG, yceO, yjhQ, and yjbE); 10 of these genes were verified through mutation to decrease biofilm formation by 40% or more (yfjR, bioF, yccW, yjbE, yceO, ttdA, fumB, yjiP, gutQ, and yihR). Hence, it appears YdgG controls the transport of the quorum-sensing signal AI-2, and so we suggest the gene name tqsA.&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Links&lt;br /&gt;
||&lt;br /&gt;
[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;amp;db=pubmed&amp;amp;dopt=Abstract&amp;amp;list_uids=16385049 PubMed] [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1347309 PMC1347309]&lt;br /&gt;
Online version:[http://dx.doi.org/10.1128/JB.188.2.587-598.2006 10.1128/JB.188.2.587-598.2006]&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Keywords&lt;br /&gt;
||&lt;br /&gt;
Biofilms/growth &amp;amp; development; Biological Transport/genetics; Escherichia coli K12/physiology; Escherichia coli Proteins/genetics; Escherichia coli Proteins/physiology; Gene Deletion; Genes, Bacterial/genetics; Homoserine/analogs &amp;amp; derivatives; Homoserine/metabolism; Lactones/metabolism; Transcription, Genetic&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.542.Q5673977fc8479&amp;amp;page=542&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=1&amp;amp;template=PMID_info_table edit table]&amp;lt;/div&amp;gt; ||&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.542.Q5673977fc8479--&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Main Points of the Paper ==&lt;br /&gt;
{{LitSignificance}}&lt;br /&gt;
&lt;br /&gt;
== Materials and Methods Used ==&lt;br /&gt;
{{LitMaterials}}&lt;br /&gt;
&lt;br /&gt;
==Phenotype Annotations==&lt;br /&gt;
{{AnnotationTableHelp}}&lt;br /&gt;
&amp;lt;protect&amp;gt;&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.542.J5673977fd2182--&amp;gt;&lt;br /&gt;
&amp;lt;!--&lt;br /&gt;
******************************************************************************************&lt;br /&gt;
* &lt;br /&gt;
*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** &lt;br /&gt;
* &lt;br /&gt;
****************************************************************************************** --&amp;gt;&lt;br /&gt;
{| border=&amp;quot;2&amp;quot; cellpadding=&amp;quot;4&amp;quot; cellspacing=&amp;quot;0&amp;quot; style=&amp;quot;margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;&amp;quot;  id=&amp;quot;J5673977fd2182&amp;quot;  class=&amp;quot; tableEdit Phenotype_Table_2&amp;quot;  &lt;br /&gt;
|- align='left' bgcolor='#CCCCFF'&lt;br /&gt;
!|Phenotype of!!Taxon Information!!Genotype Information (if known)!!Condition Information!!OMP ID!!OMP Term Name!!ECO ID!!ECO Term Name!!Notes!!Status&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.542.J5673977fd2182&amp;amp;page=542&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=0&amp;amp;template=Phenotype_Table_2 edit table]&amp;lt;/div&amp;gt; || || || || || || || || ||&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.542.J5673977fd2182--&amp;gt;&amp;lt;/protect&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Notes==&lt;br /&gt;
&lt;br /&gt;
==References==&lt;br /&gt;
{{RefHelp}}&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Publication]]&lt;/div&gt;</summary>
		<author><name>69.30.234.186</name></author>
		
	</entry>
	<entry>
		<id>https://microbialphenotypes.org/wiki/index.php?title=PMID:16385049&amp;diff=18273</id>
		<title>PMID:16385049</title>
		<link rel="alternate" type="text/html" href="https://microbialphenotypes.org/wiki/index.php?title=PMID:16385049&amp;diff=18273"/>
		<updated>2015-12-18T05:19:38Z</updated>

		<summary type="html">&lt;p&gt;69.30.234.186: Fill PMID: Page!&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{RightTOC}}&lt;br /&gt;
&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.542.K5673976ac421e--&amp;gt;&lt;br /&gt;
&amp;lt;!--&lt;br /&gt;
******************************************************************************************&lt;br /&gt;
* &lt;br /&gt;
*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** &lt;br /&gt;
* &lt;br /&gt;
****************************************************************************************** --&amp;gt;&lt;br /&gt;
{|   id=&amp;quot;K5673976ac421e&amp;quot;  class=&amp;quot; tableEdit PMID_info_table&amp;quot;  &lt;br /&gt;
&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Citation&lt;br /&gt;
||&lt;br /&gt;
'''Herzberg, M, Kaye, IK, Peti, W and Wood, TK'''  (2006) YdgG (TqsA) controls biofilm formation in Escherichia coli K-12 through autoinducer 2 transport. ''J. Bacteriol.'' '''188''':587-98&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Abstract&lt;br /&gt;
||&lt;br /&gt;
YdgG is an uncharacterized protein that is induced in Escherichia coli biofilms. Here it is shown that deletion of ydgG decreased extracellular and increased intracellular concentrations of autoinducer 2 (AI-2); hence, YdgG enhances transport of AI-2. Consistent with this hypothesis, deletion of ydgG resulted in a 7,000-fold increase in biofilm thickness and 574-fold increase in biomass in flow cells. Also consistent with the hypothesis, deletion of ydgG increased cell motility by increasing transcription of flagellar genes (genes induced by AI-2). By expressing ydgG in trans, the wild-type phenotypes for extracellular AI-2 activity, motility, and biofilm formation were restored. YdgG is also predicted to be a membrane-spanning protein that is conserved in many bacteria, and it influences resistance to several antimicrobials, including crystal violet and streptomycin (this phenotype could also be complemented). Deletion of ydgG also caused 31% of the bacterial chromosome to be differentially expressed in biofilms, as expected, since AI-2 controls hundreds of genes. YdgG was found to negatively modulate expression of flagellum- and motility-related genes, as well as other known products essential for biofilm formation, including operons for type 1 fimbriae, autotransporter protein Ag43, curli production, colanic acid production, and production of polysaccharide adhesin. Eighty genes not previously related to biofilm formation were also identified, including those that encode transport proteins (yihN and yihP), polysialic acid production (gutM and gutQ), CP4-57 prophage functions (yfjR and alpA), methionine biosynthesis (metR), biotin and thiamine biosynthesis (bioF and thiDFH), anaerobic metabolism (focB, hyfACDR, ttdA, and fumB), and proteins with unknown function (ybfG, yceO, yjhQ, and yjbE); 10 of these genes were verified through mutation to decrease biofilm formation by 40% or more (yfjR, bioF, yccW, yjbE, yceO, ttdA, fumB, yjiP, gutQ, and yihR). Hence, it appears YdgG controls the transport of the quorum-sensing signal AI-2, and so we suggest the gene name tqsA.&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Links&lt;br /&gt;
||&lt;br /&gt;
[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;amp;db=pubmed&amp;amp;dopt=Abstract&amp;amp;list_uids=16385049 PubMed] [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1347309 PMC1347309]&lt;br /&gt;
Online version:[http://dx.doi.org/10.1128/JB.188.2.587-598.2006 10.1128/JB.188.2.587-598.2006]&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Keywords&lt;br /&gt;
||&lt;br /&gt;
Biofilms/growth &amp;amp; development; Biological Transport/genetics; Escherichia coli K12/physiology; Escherichia coli Proteins/genetics; Escherichia coli Proteins/physiology; Gene Deletion; Genes, Bacterial/genetics; Homoserine/analogs &amp;amp; derivatives; Homoserine/metabolism; Lactones/metabolism; Transcription, Genetic&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.542.K5673976ac421e&amp;amp;page=542&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=1&amp;amp;template=PMID_info_table edit table]&amp;lt;/div&amp;gt; ||&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.542.K5673976ac421e--&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Main Points of the Paper ==&lt;br /&gt;
{{LitSignificance}}&lt;br /&gt;
&lt;br /&gt;
== Materials and Methods Used ==&lt;br /&gt;
{{LitMaterials}}&lt;br /&gt;
&lt;br /&gt;
==Phenotype Annotations==&lt;br /&gt;
{{AnnotationTableHelp}}&lt;br /&gt;
&amp;lt;protect&amp;gt;&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.542.S5673976ad34dd--&amp;gt;&lt;br /&gt;
&amp;lt;!--&lt;br /&gt;
******************************************************************************************&lt;br /&gt;
* &lt;br /&gt;
*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** &lt;br /&gt;
* &lt;br /&gt;
****************************************************************************************** --&amp;gt;&lt;br /&gt;
{| border=&amp;quot;2&amp;quot; cellpadding=&amp;quot;4&amp;quot; cellspacing=&amp;quot;0&amp;quot; style=&amp;quot;margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;&amp;quot;  id=&amp;quot;S5673976ad34dd&amp;quot;  class=&amp;quot; tableEdit Phenotype_Table_2&amp;quot;  &lt;br /&gt;
|- align='left' bgcolor='#CCCCFF'&lt;br /&gt;
!|Phenotype of!!Taxon Information!!Genotype Information (if known)!!Condition Information!!OMP ID!!OMP Term Name!!ECO ID!!ECO Term Name!!Notes!!Status&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.542.S5673976ad34dd&amp;amp;page=542&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=0&amp;amp;template=Phenotype_Table_2 edit table]&amp;lt;/div&amp;gt; || || || || || || || || ||&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.542.S5673976ad34dd--&amp;gt;&amp;lt;/protect&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Notes==&lt;br /&gt;
&lt;br /&gt;
==References==&lt;br /&gt;
{{RefHelp}}&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Publication]]&lt;/div&gt;</summary>
		<author><name>69.30.234.186</name></author>
		
	</entry>
	<entry>
		<id>https://microbialphenotypes.org/wiki/index.php?title=PMID:16385049&amp;diff=18272</id>
		<title>PMID:16385049</title>
		<link rel="alternate" type="text/html" href="https://microbialphenotypes.org/wiki/index.php?title=PMID:16385049&amp;diff=18272"/>
		<updated>2015-12-18T05:19:17Z</updated>

		<summary type="html">&lt;p&gt;69.30.234.186: Fill PMID: Page!&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{RightTOC}}&lt;br /&gt;
&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.542.B56739755aeb96--&amp;gt;&lt;br /&gt;
&amp;lt;!--&lt;br /&gt;
******************************************************************************************&lt;br /&gt;
* &lt;br /&gt;
*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** &lt;br /&gt;
* &lt;br /&gt;
****************************************************************************************** --&amp;gt;&lt;br /&gt;
{|   id=&amp;quot;B56739755aeb96&amp;quot;  class=&amp;quot; tableEdit PMID_info_table&amp;quot;  &lt;br /&gt;
&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Citation&lt;br /&gt;
||&lt;br /&gt;
'''Herzberg, M, Kaye, IK, Peti, W and Wood, TK'''  (2006) YdgG (TqsA) controls biofilm formation in Escherichia coli K-12 through autoinducer 2 transport. ''J. Bacteriol.'' '''188''':587-98&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Abstract&lt;br /&gt;
||&lt;br /&gt;
YdgG is an uncharacterized protein that is induced in Escherichia coli biofilms. Here it is shown that deletion of ydgG decreased extracellular and increased intracellular concentrations of autoinducer 2 (AI-2); hence, YdgG enhances transport of AI-2. Consistent with this hypothesis, deletion of ydgG resulted in a 7,000-fold increase in biofilm thickness and 574-fold increase in biomass in flow cells. Also consistent with the hypothesis, deletion of ydgG increased cell motility by increasing transcription of flagellar genes (genes induced by AI-2). By expressing ydgG in trans, the wild-type phenotypes for extracellular AI-2 activity, motility, and biofilm formation were restored. YdgG is also predicted to be a membrane-spanning protein that is conserved in many bacteria, and it influences resistance to several antimicrobials, including crystal violet and streptomycin (this phenotype could also be complemented). Deletion of ydgG also caused 31% of the bacterial chromosome to be differentially expressed in biofilms, as expected, since AI-2 controls hundreds of genes. YdgG was found to negatively modulate expression of flagellum- and motility-related genes, as well as other known products essential for biofilm formation, including operons for type 1 fimbriae, autotransporter protein Ag43, curli production, colanic acid production, and production of polysaccharide adhesin. Eighty genes not previously related to biofilm formation were also identified, including those that encode transport proteins (yihN and yihP), polysialic acid production (gutM and gutQ), CP4-57 prophage functions (yfjR and alpA), methionine biosynthesis (metR), biotin and thiamine biosynthesis (bioF and thiDFH), anaerobic metabolism (focB, hyfACDR, ttdA, and fumB), and proteins with unknown function (ybfG, yceO, yjhQ, and yjbE); 10 of these genes were verified through mutation to decrease biofilm formation by 40% or more (yfjR, bioF, yccW, yjbE, yceO, ttdA, fumB, yjiP, gutQ, and yihR). Hence, it appears YdgG controls the transport of the quorum-sensing signal AI-2, and so we suggest the gene name tqsA.&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Links&lt;br /&gt;
||&lt;br /&gt;
[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;amp;db=pubmed&amp;amp;dopt=Abstract&amp;amp;list_uids=16385049 PubMed] [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1347309 PMC1347309]&lt;br /&gt;
Online version:[http://dx.doi.org/10.1128/JB.188.2.587-598.2006 10.1128/JB.188.2.587-598.2006]&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Keywords&lt;br /&gt;
||&lt;br /&gt;
Biofilms/growth &amp;amp; development; Biological Transport/genetics; Escherichia coli K12/physiology; Escherichia coli Proteins/genetics; Escherichia coli Proteins/physiology; Gene Deletion; Genes, Bacterial/genetics; Homoserine/analogs &amp;amp; derivatives; Homoserine/metabolism; Lactones/metabolism; Transcription, Genetic&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.542.B56739755aeb96&amp;amp;page=542&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=1&amp;amp;template=PMID_info_table edit table]&amp;lt;/div&amp;gt; ||&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.542.B56739755aeb96--&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Main Points of the Paper ==&lt;br /&gt;
{{LitSignificance}}&lt;br /&gt;
&lt;br /&gt;
== Materials and Methods Used ==&lt;br /&gt;
{{LitMaterials}}&lt;br /&gt;
&lt;br /&gt;
==Phenotype Annotations==&lt;br /&gt;
{{AnnotationTableHelp}}&lt;br /&gt;
&amp;lt;protect&amp;gt;&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.542.D56739755b8b3f--&amp;gt;&lt;br /&gt;
&amp;lt;!--&lt;br /&gt;
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*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** &lt;br /&gt;
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{| border=&amp;quot;2&amp;quot; cellpadding=&amp;quot;4&amp;quot; cellspacing=&amp;quot;0&amp;quot; style=&amp;quot;margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;&amp;quot;  id=&amp;quot;D56739755b8b3f&amp;quot;  class=&amp;quot; tableEdit Phenotype_Table_2&amp;quot;  &lt;br /&gt;
|- align='left' bgcolor='#CCCCFF'&lt;br /&gt;
!|Phenotype of!!Taxon Information!!Genotype Information (if known)!!Condition Information!!OMP ID!!OMP Term Name!!ECO ID!!ECO Term Name!!Notes!!Status&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.542.D56739755b8b3f&amp;amp;page=542&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=0&amp;amp;template=Phenotype_Table_2 edit table]&amp;lt;/div&amp;gt; || || || || || || || || ||&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.542.D56739755b8b3f--&amp;gt;&amp;lt;/protect&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Notes==&lt;br /&gt;
&lt;br /&gt;
==References==&lt;br /&gt;
{{RefHelp}}&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Publication]]&lt;/div&gt;</summary>
		<author><name>69.30.234.186</name></author>
		
	</entry>
	<entry>
		<id>https://microbialphenotypes.org/wiki/index.php?title=PMID:16385049&amp;diff=18271</id>
		<title>PMID:16385049</title>
		<link rel="alternate" type="text/html" href="https://microbialphenotypes.org/wiki/index.php?title=PMID:16385049&amp;diff=18271"/>
		<updated>2015-12-18T05:18:56Z</updated>

		<summary type="html">&lt;p&gt;69.30.234.186: Fill PMID: Page!&lt;/p&gt;
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*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** &lt;br /&gt;
* &lt;br /&gt;
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{|   id=&amp;quot;L5673974039569&amp;quot;  class=&amp;quot; tableEdit PMID_info_table&amp;quot;  &lt;br /&gt;
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!align=left align='left' bgcolor='#CCCCFF' |Citation&lt;br /&gt;
||&lt;br /&gt;
'''Herzberg, M, Kaye, IK, Peti, W and Wood, TK'''  (2006) YdgG (TqsA) controls biofilm formation in Escherichia coli K-12 through autoinducer 2 transport. ''J. Bacteriol.'' '''188''':587-98&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Abstract&lt;br /&gt;
||&lt;br /&gt;
YdgG is an uncharacterized protein that is induced in Escherichia coli biofilms. Here it is shown that deletion of ydgG decreased extracellular and increased intracellular concentrations of autoinducer 2 (AI-2); hence, YdgG enhances transport of AI-2. Consistent with this hypothesis, deletion of ydgG resulted in a 7,000-fold increase in biofilm thickness and 574-fold increase in biomass in flow cells. Also consistent with the hypothesis, deletion of ydgG increased cell motility by increasing transcription of flagellar genes (genes induced by AI-2). By expressing ydgG in trans, the wild-type phenotypes for extracellular AI-2 activity, motility, and biofilm formation were restored. YdgG is also predicted to be a membrane-spanning protein that is conserved in many bacteria, and it influences resistance to several antimicrobials, including crystal violet and streptomycin (this phenotype could also be complemented). Deletion of ydgG also caused 31% of the bacterial chromosome to be differentially expressed in biofilms, as expected, since AI-2 controls hundreds of genes. YdgG was found to negatively modulate expression of flagellum- and motility-related genes, as well as other known products essential for biofilm formation, including operons for type 1 fimbriae, autotransporter protein Ag43, curli production, colanic acid production, and production of polysaccharide adhesin. Eighty genes not previously related to biofilm formation were also identified, including those that encode transport proteins (yihN and yihP), polysialic acid production (gutM and gutQ), CP4-57 prophage functions (yfjR and alpA), methionine biosynthesis (metR), biotin and thiamine biosynthesis (bioF and thiDFH), anaerobic metabolism (focB, hyfACDR, ttdA, and fumB), and proteins with unknown function (ybfG, yceO, yjhQ, and yjbE); 10 of these genes were verified through mutation to decrease biofilm formation by 40% or more (yfjR, bioF, yccW, yjbE, yceO, ttdA, fumB, yjiP, gutQ, and yihR). Hence, it appears YdgG controls the transport of the quorum-sensing signal AI-2, and so we suggest the gene name tqsA.&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Links&lt;br /&gt;
||&lt;br /&gt;
[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;amp;db=pubmed&amp;amp;dopt=Abstract&amp;amp;list_uids=16385049 PubMed] [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1347309 PMC1347309]&lt;br /&gt;
Online version:[http://dx.doi.org/10.1128/JB.188.2.587-598.2006 10.1128/JB.188.2.587-598.2006]&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Keywords&lt;br /&gt;
||&lt;br /&gt;
Biofilms/growth &amp;amp; development; Biological Transport/genetics; Escherichia coli K12/physiology; Escherichia coli Proteins/genetics; Escherichia coli Proteins/physiology; Gene Deletion; Genes, Bacterial/genetics; Homoserine/analogs &amp;amp; derivatives; Homoserine/metabolism; Lactones/metabolism; Transcription, Genetic&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.542.L5673974039569&amp;amp;page=542&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=1&amp;amp;template=PMID_info_table edit table]&amp;lt;/div&amp;gt; ||&lt;br /&gt;
|}&lt;br /&gt;
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&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.542.L5673974039569--&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Main Points of the Paper ==&lt;br /&gt;
{{LitSignificance}}&lt;br /&gt;
&lt;br /&gt;
== Materials and Methods Used ==&lt;br /&gt;
{{LitMaterials}}&lt;br /&gt;
&lt;br /&gt;
==Phenotype Annotations==&lt;br /&gt;
{{AnnotationTableHelp}}&lt;br /&gt;
&amp;lt;protect&amp;gt;&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.542.O5673974083c86--&amp;gt;&lt;br /&gt;
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* &lt;br /&gt;
*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** &lt;br /&gt;
* &lt;br /&gt;
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{| border=&amp;quot;2&amp;quot; cellpadding=&amp;quot;4&amp;quot; cellspacing=&amp;quot;0&amp;quot; style=&amp;quot;margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;&amp;quot;  id=&amp;quot;O5673974083c86&amp;quot;  class=&amp;quot; tableEdit Phenotype_Table_2&amp;quot;  &lt;br /&gt;
|- align='left' bgcolor='#CCCCFF'&lt;br /&gt;
!|Phenotype of!!Taxon Information!!Genotype Information (if known)!!Condition Information!!OMP ID!!OMP Term Name!!ECO ID!!ECO Term Name!!Notes!!Status&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.542.O5673974083c86&amp;amp;page=542&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=0&amp;amp;template=Phenotype_Table_2 edit table]&amp;lt;/div&amp;gt; || || || || || || || || ||&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.542.O5673974083c86--&amp;gt;&amp;lt;/protect&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Notes==&lt;br /&gt;
&lt;br /&gt;
==References==&lt;br /&gt;
{{RefHelp}}&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Publication]]&lt;/div&gt;</summary>
		<author><name>69.30.234.186</name></author>
		
	</entry>
	<entry>
		<id>https://microbialphenotypes.org/wiki/index.php?title=PMID:11929534&amp;diff=18270</id>
		<title>PMID:11929534</title>
		<link rel="alternate" type="text/html" href="https://microbialphenotypes.org/wiki/index.php?title=PMID:11929534&amp;diff=18270"/>
		<updated>2015-12-18T05:18:35Z</updated>

		<summary type="html">&lt;p&gt;69.30.234.186: Fill PMID: Page!&lt;/p&gt;
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&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.3338.L5673972acb625--&amp;gt;&lt;br /&gt;
&amp;lt;!--&lt;br /&gt;
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* &lt;br /&gt;
*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** &lt;br /&gt;
* &lt;br /&gt;
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{|   id=&amp;quot;L5673972acb625&amp;quot;  class=&amp;quot; tableEdit PMID_info_table&amp;quot;  &lt;br /&gt;
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!align=left align='left' bgcolor='#CCCCFF' |Citation&lt;br /&gt;
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'''Sperandio, V, Torres, AG and Kaper, JB'''  (2002) Quorum sensing Escherichia coli regulators B and C (QseBC): a novel two-component regulatory system involved in the regulation of flagella and motility by quorum sensing in E. coli. ''Mol. Microbiol.'' '''43''':809-21&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Abstract&lt;br /&gt;
||&lt;br /&gt;
Quorum sensing is a cell-to-cell signalling mechanism in which bacteria secrete hormone-like compounds called autoinducers. When these auto-inducers reach a certain threshold concentration, they interact with bacterial transcriptional regulators, thereby regulating gene expression. Enterohaemorrhagic Escherichia coli (EHEC) O157:H7 as well as E. coli K-12 produces the autoinducer-2 (AI-2), which is synthesized by the product of the luxS gene, and previous work from our laboratory has shown that genes encoding the EHEC type III secretion system were activated by quorum sensing. Recently, by hybridizing an E. coli K-12 gene array with cDNA synthesized from RNA extracted from EHEC strain 86-24 and its isogenic luxS mutant, we observed that other potential virulence-associated factors, such as genes encoding the expression and assembly of flagella, motility and chemotaxis, were also activated by quorum sensing. The array data also indicated that several genes encoding putative E. coli regulators were controlled by quorum sensing. In this report, we describe a two-component system regulated by quorum sensing that shares homology with Salmonella typhimurium PmrAB, which we have named quorum sensing E. coli regulator B and C (QseBC). The qseBC genes, previously identified only as open reading frames b3025 and b3026, are organized in an operon in the E. coli chromosome, with qseB encoding the response regulator and qseC the sensor kinase. We confirmed the regulation of qseBC by quorum sensing using qseB::lacZ transcriptional fusions and characterized the phenotypes of an isogenic qseC mutation in EHEC. This mutant expressed less flagellin and had reduced motility compared with the wild-type and complemented strains. Transcription of flhD, fliA, motA and fliC::lacZ fusions was decreased in the qseC mutant, suggesting that qseBC is a transcriptional regulator of flagella genes. A qseC mutant was also generated in E. coli K-12 strain MC1000 that showed the same phenotypes as the EHEC mutant, indicating that qseBC regulates flagella and motility by quorum sensing in both EHEC and K-12. QseBC activates transcription of flhDC, which is the master regulator for the flagella and motility genes and, in the absence of flhD, QseBC failed to activate the transcription of fliA. Motility of a luxS, but not of a qseC, mutant can be restored by providing AI-2 exogenously as preconditioned media, suggesting that the qseC mutant is unable to respond to AI-2. However, QseC has no effect on the expression of other quorum sensing-controlled genes such as those encoding for the type III secretion system. These data indicate that QseBC is one component of the quorum-sensing regulatory cascade in both EHEC and K-12 that is involved in the regulation of flagella and motility genes, but that additional regulators in this cascade remain to be characterized.&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Links&lt;br /&gt;
||&lt;br /&gt;
[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;amp;db=pubmed&amp;amp;dopt=Abstract&amp;amp;list_uids=11929534 PubMed]&lt;br /&gt;
&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Keywords&lt;br /&gt;
||&lt;br /&gt;
DNA-Binding Proteins/genetics; DNA-Binding Proteins/metabolism; Escherichia coli/physiology; Escherichia coli Proteins/genetics; Escherichia coli Proteins/metabolism; Flagella/physiology; Gene Expression Regulation, Bacterial; Molecular Sequence Data; Mutation; Promoter Regions, Genetic; Regulon; Trans-Activators/genetics; Trans-Activators/metabolism; Transcription, Genetic&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.3338.L5673972acb625&amp;amp;page=3338&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=1&amp;amp;template=PMID_info_table edit table]&amp;lt;/div&amp;gt; ||&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.3338.L5673972acb625--&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Main Points of the Paper ==&lt;br /&gt;
{{LitSignificance}}&lt;br /&gt;
&lt;br /&gt;
== Materials and Methods Used ==&lt;br /&gt;
{{LitMaterials}}&lt;br /&gt;
&lt;br /&gt;
==Phenotype Annotations==&lt;br /&gt;
{{AnnotationTableHelp}}&lt;br /&gt;
&amp;lt;protect&amp;gt;&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.3338.G5673972ad6df9--&amp;gt;&lt;br /&gt;
&amp;lt;!--&lt;br /&gt;
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* &lt;br /&gt;
*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** &lt;br /&gt;
* &lt;br /&gt;
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|- align='left' bgcolor='#CCCCFF'&lt;br /&gt;
!|Phenotype of!!Taxon Information!!Genotype Information (if known)!!Condition Information!!OMP ID!!OMP Term Name!!ECO ID!!ECO Term Name!!Notes!!Status&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.3338.G5673972ad6df9&amp;amp;page=3338&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=0&amp;amp;template=Phenotype_Table_2 edit table]&amp;lt;/div&amp;gt; || || || || || || || || ||&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.3338.G5673972ad6df9--&amp;gt;&amp;lt;/protect&amp;gt;&lt;br /&gt;
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==Notes==&lt;br /&gt;
&lt;br /&gt;
==References==&lt;br /&gt;
{{RefHelp}}&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Publication]]&lt;/div&gt;</summary>
		<author><name>69.30.234.186</name></author>
		
	</entry>
	<entry>
		<id>https://microbialphenotypes.org/wiki/index.php?title=PMID:11929534&amp;diff=18269</id>
		<title>PMID:11929534</title>
		<link rel="alternate" type="text/html" href="https://microbialphenotypes.org/wiki/index.php?title=PMID:11929534&amp;diff=18269"/>
		<updated>2015-12-18T05:18:13Z</updated>

		<summary type="html">&lt;p&gt;69.30.234.186: Fill PMID: Page!&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{RightTOC}}&lt;br /&gt;
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&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.3338.A56739715bf231--&amp;gt;&lt;br /&gt;
&amp;lt;!--&lt;br /&gt;
******************************************************************************************&lt;br /&gt;
* &lt;br /&gt;
*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** &lt;br /&gt;
* &lt;br /&gt;
****************************************************************************************** --&amp;gt;&lt;br /&gt;
{|   id=&amp;quot;A56739715bf231&amp;quot;  class=&amp;quot; tableEdit PMID_info_table&amp;quot;  &lt;br /&gt;
&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Citation&lt;br /&gt;
||&lt;br /&gt;
'''Sperandio, V, Torres, AG and Kaper, JB'''  (2002) Quorum sensing Escherichia coli regulators B and C (QseBC): a novel two-component regulatory system involved in the regulation of flagella and motility by quorum sensing in E. coli. ''Mol. Microbiol.'' '''43''':809-21&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Abstract&lt;br /&gt;
||&lt;br /&gt;
Quorum sensing is a cell-to-cell signalling mechanism in which bacteria secrete hormone-like compounds called autoinducers. When these auto-inducers reach a certain threshold concentration, they interact with bacterial transcriptional regulators, thereby regulating gene expression. Enterohaemorrhagic Escherichia coli (EHEC) O157:H7 as well as E. coli K-12 produces the autoinducer-2 (AI-2), which is synthesized by the product of the luxS gene, and previous work from our laboratory has shown that genes encoding the EHEC type III secretion system were activated by quorum sensing. Recently, by hybridizing an E. coli K-12 gene array with cDNA synthesized from RNA extracted from EHEC strain 86-24 and its isogenic luxS mutant, we observed that other potential virulence-associated factors, such as genes encoding the expression and assembly of flagella, motility and chemotaxis, were also activated by quorum sensing. The array data also indicated that several genes encoding putative E. coli regulators were controlled by quorum sensing. In this report, we describe a two-component system regulated by quorum sensing that shares homology with Salmonella typhimurium PmrAB, which we have named quorum sensing E. coli regulator B and C (QseBC). The qseBC genes, previously identified only as open reading frames b3025 and b3026, are organized in an operon in the E. coli chromosome, with qseB encoding the response regulator and qseC the sensor kinase. We confirmed the regulation of qseBC by quorum sensing using qseB::lacZ transcriptional fusions and characterized the phenotypes of an isogenic qseC mutation in EHEC. This mutant expressed less flagellin and had reduced motility compared with the wild-type and complemented strains. Transcription of flhD, fliA, motA and fliC::lacZ fusions was decreased in the qseC mutant, suggesting that qseBC is a transcriptional regulator of flagella genes. A qseC mutant was also generated in E. coli K-12 strain MC1000 that showed the same phenotypes as the EHEC mutant, indicating that qseBC regulates flagella and motility by quorum sensing in both EHEC and K-12. QseBC activates transcription of flhDC, which is the master regulator for the flagella and motility genes and, in the absence of flhD, QseBC failed to activate the transcription of fliA. Motility of a luxS, but not of a qseC, mutant can be restored by providing AI-2 exogenously as preconditioned media, suggesting that the qseC mutant is unable to respond to AI-2. However, QseC has no effect on the expression of other quorum sensing-controlled genes such as those encoding for the type III secretion system. These data indicate that QseBC is one component of the quorum-sensing regulatory cascade in both EHEC and K-12 that is involved in the regulation of flagella and motility genes, but that additional regulators in this cascade remain to be characterized.&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Links&lt;br /&gt;
||&lt;br /&gt;
[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;amp;db=pubmed&amp;amp;dopt=Abstract&amp;amp;list_uids=11929534 PubMed]&lt;br /&gt;
&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Keywords&lt;br /&gt;
||&lt;br /&gt;
DNA-Binding Proteins/genetics; DNA-Binding Proteins/metabolism; Escherichia coli/physiology; Escherichia coli Proteins/genetics; Escherichia coli Proteins/metabolism; Flagella/physiology; Gene Expression Regulation, Bacterial; Molecular Sequence Data; Mutation; Promoter Regions, Genetic; Regulon; Trans-Activators/genetics; Trans-Activators/metabolism; Transcription, Genetic&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.3338.A56739715bf231&amp;amp;page=3338&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=1&amp;amp;template=PMID_info_table edit table]&amp;lt;/div&amp;gt; ||&lt;br /&gt;
|}&lt;br /&gt;
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&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.3338.A56739715bf231--&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Main Points of the Paper ==&lt;br /&gt;
{{LitSignificance}}&lt;br /&gt;
&lt;br /&gt;
== Materials and Methods Used ==&lt;br /&gt;
{{LitMaterials}}&lt;br /&gt;
&lt;br /&gt;
==Phenotype Annotations==&lt;br /&gt;
{{AnnotationTableHelp}}&lt;br /&gt;
&amp;lt;protect&amp;gt;&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.3338.D56739715cadab--&amp;gt;&lt;br /&gt;
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*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** &lt;br /&gt;
* &lt;br /&gt;
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{| border=&amp;quot;2&amp;quot; cellpadding=&amp;quot;4&amp;quot; cellspacing=&amp;quot;0&amp;quot; style=&amp;quot;margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;&amp;quot;  id=&amp;quot;D56739715cadab&amp;quot;  class=&amp;quot; tableEdit Phenotype_Table_2&amp;quot;  &lt;br /&gt;
|- align='left' bgcolor='#CCCCFF'&lt;br /&gt;
!|Phenotype of!!Taxon Information!!Genotype Information (if known)!!Condition Information!!OMP ID!!OMP Term Name!!ECO ID!!ECO Term Name!!Notes!!Status&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.3338.D56739715cadab&amp;amp;page=3338&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=0&amp;amp;template=Phenotype_Table_2 edit table]&amp;lt;/div&amp;gt; || || || || || || || || ||&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.3338.D56739715cadab--&amp;gt;&amp;lt;/protect&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Notes==&lt;br /&gt;
&lt;br /&gt;
==References==&lt;br /&gt;
{{RefHelp}}&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Publication]]&lt;/div&gt;</summary>
		<author><name>69.30.234.186</name></author>
		
	</entry>
	<entry>
		<id>https://microbialphenotypes.org/wiki/index.php?title=PMID:11929534&amp;diff=18268</id>
		<title>PMID:11929534</title>
		<link rel="alternate" type="text/html" href="https://microbialphenotypes.org/wiki/index.php?title=PMID:11929534&amp;diff=18268"/>
		<updated>2015-12-18T05:17:51Z</updated>

		<summary type="html">&lt;p&gt;69.30.234.186: Fill PMID: Page!&lt;/p&gt;
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* &lt;br /&gt;
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{|   id=&amp;quot;S567396ffc5035&amp;quot;  class=&amp;quot; tableEdit PMID_info_table&amp;quot;  &lt;br /&gt;
&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Citation&lt;br /&gt;
||&lt;br /&gt;
'''Sperandio, V, Torres, AG and Kaper, JB'''  (2002) Quorum sensing Escherichia coli regulators B and C (QseBC): a novel two-component regulatory system involved in the regulation of flagella and motility by quorum sensing in E. coli. ''Mol. Microbiol.'' '''43''':809-21&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Abstract&lt;br /&gt;
||&lt;br /&gt;
Quorum sensing is a cell-to-cell signalling mechanism in which bacteria secrete hormone-like compounds called autoinducers. When these auto-inducers reach a certain threshold concentration, they interact with bacterial transcriptional regulators, thereby regulating gene expression. Enterohaemorrhagic Escherichia coli (EHEC) O157:H7 as well as E. coli K-12 produces the autoinducer-2 (AI-2), which is synthesized by the product of the luxS gene, and previous work from our laboratory has shown that genes encoding the EHEC type III secretion system were activated by quorum sensing. Recently, by hybridizing an E. coli K-12 gene array with cDNA synthesized from RNA extracted from EHEC strain 86-24 and its isogenic luxS mutant, we observed that other potential virulence-associated factors, such as genes encoding the expression and assembly of flagella, motility and chemotaxis, were also activated by quorum sensing. The array data also indicated that several genes encoding putative E. coli regulators were controlled by quorum sensing. In this report, we describe a two-component system regulated by quorum sensing that shares homology with Salmonella typhimurium PmrAB, which we have named quorum sensing E. coli regulator B and C (QseBC). The qseBC genes, previously identified only as open reading frames b3025 and b3026, are organized in an operon in the E. coli chromosome, with qseB encoding the response regulator and qseC the sensor kinase. We confirmed the regulation of qseBC by quorum sensing using qseB::lacZ transcriptional fusions and characterized the phenotypes of an isogenic qseC mutation in EHEC. This mutant expressed less flagellin and had reduced motility compared with the wild-type and complemented strains. Transcription of flhD, fliA, motA and fliC::lacZ fusions was decreased in the qseC mutant, suggesting that qseBC is a transcriptional regulator of flagella genes. A qseC mutant was also generated in E. coli K-12 strain MC1000 that showed the same phenotypes as the EHEC mutant, indicating that qseBC regulates flagella and motility by quorum sensing in both EHEC and K-12. QseBC activates transcription of flhDC, which is the master regulator for the flagella and motility genes and, in the absence of flhD, QseBC failed to activate the transcription of fliA. Motility of a luxS, but not of a qseC, mutant can be restored by providing AI-2 exogenously as preconditioned media, suggesting that the qseC mutant is unable to respond to AI-2. However, QseC has no effect on the expression of other quorum sensing-controlled genes such as those encoding for the type III secretion system. These data indicate that QseBC is one component of the quorum-sensing regulatory cascade in both EHEC and K-12 that is involved in the regulation of flagella and motility genes, but that additional regulators in this cascade remain to be characterized.&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Links&lt;br /&gt;
||&lt;br /&gt;
[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;amp;db=pubmed&amp;amp;dopt=Abstract&amp;amp;list_uids=11929534 PubMed]&lt;br /&gt;
&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Keywords&lt;br /&gt;
||&lt;br /&gt;
DNA-Binding Proteins/genetics; DNA-Binding Proteins/metabolism; Escherichia coli/physiology; Escherichia coli Proteins/genetics; Escherichia coli Proteins/metabolism; Flagella/physiology; Gene Expression Regulation, Bacterial; Molecular Sequence Data; Mutation; Promoter Regions, Genetic; Regulon; Trans-Activators/genetics; Trans-Activators/metabolism; Transcription, Genetic&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.3338.S567396ffc5035&amp;amp;page=3338&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=1&amp;amp;template=PMID_info_table edit table]&amp;lt;/div&amp;gt; ||&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.3338.S567396ffc5035--&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Main Points of the Paper ==&lt;br /&gt;
{{LitSignificance}}&lt;br /&gt;
&lt;br /&gt;
== Materials and Methods Used ==&lt;br /&gt;
{{LitMaterials}}&lt;br /&gt;
&lt;br /&gt;
==Phenotype Annotations==&lt;br /&gt;
{{AnnotationTableHelp}}&lt;br /&gt;
&amp;lt;protect&amp;gt;&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.3338.R567396ffcf725--&amp;gt;&lt;br /&gt;
&amp;lt;!--&lt;br /&gt;
******************************************************************************************&lt;br /&gt;
* &lt;br /&gt;
*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** &lt;br /&gt;
* &lt;br /&gt;
****************************************************************************************** --&amp;gt;&lt;br /&gt;
{| border=&amp;quot;2&amp;quot; cellpadding=&amp;quot;4&amp;quot; cellspacing=&amp;quot;0&amp;quot; style=&amp;quot;margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;&amp;quot;  id=&amp;quot;R567396ffcf725&amp;quot;  class=&amp;quot; tableEdit Phenotype_Table_2&amp;quot;  &lt;br /&gt;
|- align='left' bgcolor='#CCCCFF'&lt;br /&gt;
!|Phenotype of!!Taxon Information!!Genotype Information (if known)!!Condition Information!!OMP ID!!OMP Term Name!!ECO ID!!ECO Term Name!!Notes!!Status&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.3338.R567396ffcf725&amp;amp;page=3338&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=0&amp;amp;template=Phenotype_Table_2 edit table]&amp;lt;/div&amp;gt; || || || || || || || || ||&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.3338.R567396ffcf725--&amp;gt;&amp;lt;/protect&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Notes==&lt;br /&gt;
&lt;br /&gt;
==References==&lt;br /&gt;
{{RefHelp}}&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Publication]]&lt;/div&gt;</summary>
		<author><name>69.30.234.186</name></author>
		
	</entry>
	<entry>
		<id>https://microbialphenotypes.org/wiki/index.php?title=PMID:11929534&amp;diff=18267</id>
		<title>PMID:11929534</title>
		<link rel="alternate" type="text/html" href="https://microbialphenotypes.org/wiki/index.php?title=PMID:11929534&amp;diff=18267"/>
		<updated>2015-12-18T05:17:30Z</updated>

		<summary type="html">&lt;p&gt;69.30.234.186: Fill PMID: Page!&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{RightTOC}}&lt;br /&gt;
&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.3338.U567396eaab9eb--&amp;gt;&lt;br /&gt;
&amp;lt;!--&lt;br /&gt;
******************************************************************************************&lt;br /&gt;
* &lt;br /&gt;
*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** &lt;br /&gt;
* &lt;br /&gt;
****************************************************************************************** --&amp;gt;&lt;br /&gt;
{|   id=&amp;quot;U567396eaab9eb&amp;quot;  class=&amp;quot; tableEdit PMID_info_table&amp;quot;  &lt;br /&gt;
&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Citation&lt;br /&gt;
||&lt;br /&gt;
'''Sperandio, V, Torres, AG and Kaper, JB'''  (2002) Quorum sensing Escherichia coli regulators B and C (QseBC): a novel two-component regulatory system involved in the regulation of flagella and motility by quorum sensing in E. coli. ''Mol. Microbiol.'' '''43''':809-21&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Abstract&lt;br /&gt;
||&lt;br /&gt;
Quorum sensing is a cell-to-cell signalling mechanism in which bacteria secrete hormone-like compounds called autoinducers. When these auto-inducers reach a certain threshold concentration, they interact with bacterial transcriptional regulators, thereby regulating gene expression. Enterohaemorrhagic Escherichia coli (EHEC) O157:H7 as well as E. coli K-12 produces the autoinducer-2 (AI-2), which is synthesized by the product of the luxS gene, and previous work from our laboratory has shown that genes encoding the EHEC type III secretion system were activated by quorum sensing. Recently, by hybridizing an E. coli K-12 gene array with cDNA synthesized from RNA extracted from EHEC strain 86-24 and its isogenic luxS mutant, we observed that other potential virulence-associated factors, such as genes encoding the expression and assembly of flagella, motility and chemotaxis, were also activated by quorum sensing. The array data also indicated that several genes encoding putative E. coli regulators were controlled by quorum sensing. In this report, we describe a two-component system regulated by quorum sensing that shares homology with Salmonella typhimurium PmrAB, which we have named quorum sensing E. coli regulator B and C (QseBC). The qseBC genes, previously identified only as open reading frames b3025 and b3026, are organized in an operon in the E. coli chromosome, with qseB encoding the response regulator and qseC the sensor kinase. We confirmed the regulation of qseBC by quorum sensing using qseB::lacZ transcriptional fusions and characterized the phenotypes of an isogenic qseC mutation in EHEC. This mutant expressed less flagellin and had reduced motility compared with the wild-type and complemented strains. Transcription of flhD, fliA, motA and fliC::lacZ fusions was decreased in the qseC mutant, suggesting that qseBC is a transcriptional regulator of flagella genes. A qseC mutant was also generated in E. coli K-12 strain MC1000 that showed the same phenotypes as the EHEC mutant, indicating that qseBC regulates flagella and motility by quorum sensing in both EHEC and K-12. QseBC activates transcription of flhDC, which is the master regulator for the flagella and motility genes and, in the absence of flhD, QseBC failed to activate the transcription of fliA. Motility of a luxS, but not of a qseC, mutant can be restored by providing AI-2 exogenously as preconditioned media, suggesting that the qseC mutant is unable to respond to AI-2. However, QseC has no effect on the expression of other quorum sensing-controlled genes such as those encoding for the type III secretion system. These data indicate that QseBC is one component of the quorum-sensing regulatory cascade in both EHEC and K-12 that is involved in the regulation of flagella and motility genes, but that additional regulators in this cascade remain to be characterized.&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Links&lt;br /&gt;
||&lt;br /&gt;
[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;amp;db=pubmed&amp;amp;dopt=Abstract&amp;amp;list_uids=11929534 PubMed]&lt;br /&gt;
&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Keywords&lt;br /&gt;
||&lt;br /&gt;
DNA-Binding Proteins/genetics; DNA-Binding Proteins/metabolism; Escherichia coli/physiology; Escherichia coli Proteins/genetics; Escherichia coli Proteins/metabolism; Flagella/physiology; Gene Expression Regulation, Bacterial; Molecular Sequence Data; Mutation; Promoter Regions, Genetic; Regulon; Trans-Activators/genetics; Trans-Activators/metabolism; Transcription, Genetic&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.3338.U567396eaab9eb&amp;amp;page=3338&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=1&amp;amp;template=PMID_info_table edit table]&amp;lt;/div&amp;gt; ||&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.3338.U567396eaab9eb--&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Main Points of the Paper ==&lt;br /&gt;
{{LitSignificance}}&lt;br /&gt;
&lt;br /&gt;
== Materials and Methods Used ==&lt;br /&gt;
{{LitMaterials}}&lt;br /&gt;
&lt;br /&gt;
==Phenotype Annotations==&lt;br /&gt;
{{AnnotationTableHelp}}&lt;br /&gt;
&amp;lt;protect&amp;gt;&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.3338.P567396eabcb71--&amp;gt;&lt;br /&gt;
&amp;lt;!--&lt;br /&gt;
******************************************************************************************&lt;br /&gt;
* &lt;br /&gt;
*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** &lt;br /&gt;
* &lt;br /&gt;
****************************************************************************************** --&amp;gt;&lt;br /&gt;
{| border=&amp;quot;2&amp;quot; cellpadding=&amp;quot;4&amp;quot; cellspacing=&amp;quot;0&amp;quot; style=&amp;quot;margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;&amp;quot;  id=&amp;quot;P567396eabcb71&amp;quot;  class=&amp;quot; tableEdit Phenotype_Table_2&amp;quot;  &lt;br /&gt;
|- align='left' bgcolor='#CCCCFF'&lt;br /&gt;
!|Phenotype of!!Taxon Information!!Genotype Information (if known)!!Condition Information!!OMP ID!!OMP Term Name!!ECO ID!!ECO Term Name!!Notes!!Status&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.3338.P567396eabcb71&amp;amp;page=3338&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=0&amp;amp;template=Phenotype_Table_2 edit table]&amp;lt;/div&amp;gt; || || || || || || || || ||&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.3338.P567396eabcb71--&amp;gt;&amp;lt;/protect&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Notes==&lt;br /&gt;
&lt;br /&gt;
==References==&lt;br /&gt;
{{RefHelp}}&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Publication]]&lt;/div&gt;</summary>
		<author><name>69.30.234.186</name></author>
		
	</entry>
	<entry>
		<id>https://microbialphenotypes.org/wiki/index.php?title=PMID:11929534&amp;diff=18266</id>
		<title>PMID:11929534</title>
		<link rel="alternate" type="text/html" href="https://microbialphenotypes.org/wiki/index.php?title=PMID:11929534&amp;diff=18266"/>
		<updated>2015-12-18T05:17:08Z</updated>

		<summary type="html">&lt;p&gt;69.30.234.186: Fill PMID: Page!&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{RightTOC}}&lt;br /&gt;
&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.3338.Y567396d4a938a--&amp;gt;&lt;br /&gt;
&amp;lt;!--&lt;br /&gt;
******************************************************************************************&lt;br /&gt;
* &lt;br /&gt;
*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** &lt;br /&gt;
* &lt;br /&gt;
****************************************************************************************** --&amp;gt;&lt;br /&gt;
{|   id=&amp;quot;Y567396d4a938a&amp;quot;  class=&amp;quot; tableEdit PMID_info_table&amp;quot;  &lt;br /&gt;
&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Citation&lt;br /&gt;
||&lt;br /&gt;
'''Sperandio, V, Torres, AG and Kaper, JB'''  (2002) Quorum sensing Escherichia coli regulators B and C (QseBC): a novel two-component regulatory system involved in the regulation of flagella and motility by quorum sensing in E. coli. ''Mol. Microbiol.'' '''43''':809-21&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Abstract&lt;br /&gt;
||&lt;br /&gt;
Quorum sensing is a cell-to-cell signalling mechanism in which bacteria secrete hormone-like compounds called autoinducers. When these auto-inducers reach a certain threshold concentration, they interact with bacterial transcriptional regulators, thereby regulating gene expression. Enterohaemorrhagic Escherichia coli (EHEC) O157:H7 as well as E. coli K-12 produces the autoinducer-2 (AI-2), which is synthesized by the product of the luxS gene, and previous work from our laboratory has shown that genes encoding the EHEC type III secretion system were activated by quorum sensing. Recently, by hybridizing an E. coli K-12 gene array with cDNA synthesized from RNA extracted from EHEC strain 86-24 and its isogenic luxS mutant, we observed that other potential virulence-associated factors, such as genes encoding the expression and assembly of flagella, motility and chemotaxis, were also activated by quorum sensing. The array data also indicated that several genes encoding putative E. coli regulators were controlled by quorum sensing. In this report, we describe a two-component system regulated by quorum sensing that shares homology with Salmonella typhimurium PmrAB, which we have named quorum sensing E. coli regulator B and C (QseBC). The qseBC genes, previously identified only as open reading frames b3025 and b3026, are organized in an operon in the E. coli chromosome, with qseB encoding the response regulator and qseC the sensor kinase. We confirmed the regulation of qseBC by quorum sensing using qseB::lacZ transcriptional fusions and characterized the phenotypes of an isogenic qseC mutation in EHEC. This mutant expressed less flagellin and had reduced motility compared with the wild-type and complemented strains. Transcription of flhD, fliA, motA and fliC::lacZ fusions was decreased in the qseC mutant, suggesting that qseBC is a transcriptional regulator of flagella genes. A qseC mutant was also generated in E. coli K-12 strain MC1000 that showed the same phenotypes as the EHEC mutant, indicating that qseBC regulates flagella and motility by quorum sensing in both EHEC and K-12. QseBC activates transcription of flhDC, which is the master regulator for the flagella and motility genes and, in the absence of flhD, QseBC failed to activate the transcription of fliA. Motility of a luxS, but not of a qseC, mutant can be restored by providing AI-2 exogenously as preconditioned media, suggesting that the qseC mutant is unable to respond to AI-2. However, QseC has no effect on the expression of other quorum sensing-controlled genes such as those encoding for the type III secretion system. These data indicate that QseBC is one component of the quorum-sensing regulatory cascade in both EHEC and K-12 that is involved in the regulation of flagella and motility genes, but that additional regulators in this cascade remain to be characterized.&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Links&lt;br /&gt;
||&lt;br /&gt;
[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;amp;db=pubmed&amp;amp;dopt=Abstract&amp;amp;list_uids=11929534 PubMed]&lt;br /&gt;
&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Keywords&lt;br /&gt;
||&lt;br /&gt;
DNA-Binding Proteins/genetics; DNA-Binding Proteins/metabolism; Escherichia coli/physiology; Escherichia coli Proteins/genetics; Escherichia coli Proteins/metabolism; Flagella/physiology; Gene Expression Regulation, Bacterial; Molecular Sequence Data; Mutation; Promoter Regions, Genetic; Regulon; Trans-Activators/genetics; Trans-Activators/metabolism; Transcription, Genetic&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.3338.Y567396d4a938a&amp;amp;page=3338&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=1&amp;amp;template=PMID_info_table edit table]&amp;lt;/div&amp;gt; ||&lt;br /&gt;
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&amp;lt;noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.3338.Y567396d4a938a--&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Main Points of the Paper ==&lt;br /&gt;
{{LitSignificance}}&lt;br /&gt;
&lt;br /&gt;
== Materials and Methods Used ==&lt;br /&gt;
{{LitMaterials}}&lt;br /&gt;
&lt;br /&gt;
==Phenotype Annotations==&lt;br /&gt;
{{AnnotationTableHelp}}&lt;br /&gt;
&amp;lt;protect&amp;gt;&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.3338.C567396d4b9512--&amp;gt;&lt;br /&gt;
&amp;lt;!--&lt;br /&gt;
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*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** &lt;br /&gt;
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{| border=&amp;quot;2&amp;quot; cellpadding=&amp;quot;4&amp;quot; cellspacing=&amp;quot;0&amp;quot; style=&amp;quot;margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;&amp;quot;  id=&amp;quot;C567396d4b9512&amp;quot;  class=&amp;quot; tableEdit Phenotype_Table_2&amp;quot;  &lt;br /&gt;
|- align='left' bgcolor='#CCCCFF'&lt;br /&gt;
!|Phenotype of!!Taxon Information!!Genotype Information (if known)!!Condition Information!!OMP ID!!OMP Term Name!!ECO ID!!ECO Term Name!!Notes!!Status&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.3338.C567396d4b9512&amp;amp;page=3338&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=0&amp;amp;template=Phenotype_Table_2 edit table]&amp;lt;/div&amp;gt; || || || || || || || || ||&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.3338.C567396d4b9512--&amp;gt;&amp;lt;/protect&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Notes==&lt;br /&gt;
&lt;br /&gt;
==References==&lt;br /&gt;
{{RefHelp}}&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Publication]]&lt;/div&gt;</summary>
		<author><name>69.30.234.186</name></author>
		
	</entry>
	<entry>
		<id>https://microbialphenotypes.org/wiki/index.php?title=PMID:11929534&amp;diff=18265</id>
		<title>PMID:11929534</title>
		<link rel="alternate" type="text/html" href="https://microbialphenotypes.org/wiki/index.php?title=PMID:11929534&amp;diff=18265"/>
		<updated>2015-12-18T05:16:45Z</updated>

		<summary type="html">&lt;p&gt;69.30.234.186: Fill PMID: Page!&lt;/p&gt;
&lt;hr /&gt;
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* &lt;br /&gt;
*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** &lt;br /&gt;
* &lt;br /&gt;
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{|   id=&amp;quot;G567396bdab4a2&amp;quot;  class=&amp;quot; tableEdit PMID_info_table&amp;quot;  &lt;br /&gt;
&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Citation&lt;br /&gt;
||&lt;br /&gt;
'''Sperandio, V, Torres, AG and Kaper, JB'''  (2002) Quorum sensing Escherichia coli regulators B and C (QseBC): a novel two-component regulatory system involved in the regulation of flagella and motility by quorum sensing in E. coli. ''Mol. Microbiol.'' '''43''':809-21&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Abstract&lt;br /&gt;
||&lt;br /&gt;
Quorum sensing is a cell-to-cell signalling mechanism in which bacteria secrete hormone-like compounds called autoinducers. When these auto-inducers reach a certain threshold concentration, they interact with bacterial transcriptional regulators, thereby regulating gene expression. Enterohaemorrhagic Escherichia coli (EHEC) O157:H7 as well as E. coli K-12 produces the autoinducer-2 (AI-2), which is synthesized by the product of the luxS gene, and previous work from our laboratory has shown that genes encoding the EHEC type III secretion system were activated by quorum sensing. Recently, by hybridizing an E. coli K-12 gene array with cDNA synthesized from RNA extracted from EHEC strain 86-24 and its isogenic luxS mutant, we observed that other potential virulence-associated factors, such as genes encoding the expression and assembly of flagella, motility and chemotaxis, were also activated by quorum sensing. The array data also indicated that several genes encoding putative E. coli regulators were controlled by quorum sensing. In this report, we describe a two-component system regulated by quorum sensing that shares homology with Salmonella typhimurium PmrAB, which we have named quorum sensing E. coli regulator B and C (QseBC). The qseBC genes, previously identified only as open reading frames b3025 and b3026, are organized in an operon in the E. coli chromosome, with qseB encoding the response regulator and qseC the sensor kinase. We confirmed the regulation of qseBC by quorum sensing using qseB::lacZ transcriptional fusions and characterized the phenotypes of an isogenic qseC mutation in EHEC. This mutant expressed less flagellin and had reduced motility compared with the wild-type and complemented strains. Transcription of flhD, fliA, motA and fliC::lacZ fusions was decreased in the qseC mutant, suggesting that qseBC is a transcriptional regulator of flagella genes. A qseC mutant was also generated in E. coli K-12 strain MC1000 that showed the same phenotypes as the EHEC mutant, indicating that qseBC regulates flagella and motility by quorum sensing in both EHEC and K-12. QseBC activates transcription of flhDC, which is the master regulator for the flagella and motility genes and, in the absence of flhD, QseBC failed to activate the transcription of fliA. Motility of a luxS, but not of a qseC, mutant can be restored by providing AI-2 exogenously as preconditioned media, suggesting that the qseC mutant is unable to respond to AI-2. However, QseC has no effect on the expression of other quorum sensing-controlled genes such as those encoding for the type III secretion system. These data indicate that QseBC is one component of the quorum-sensing regulatory cascade in both EHEC and K-12 that is involved in the regulation of flagella and motility genes, but that additional regulators in this cascade remain to be characterized.&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Links&lt;br /&gt;
||&lt;br /&gt;
[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;amp;db=pubmed&amp;amp;dopt=Abstract&amp;amp;list_uids=11929534 PubMed]&lt;br /&gt;
&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Keywords&lt;br /&gt;
||&lt;br /&gt;
DNA-Binding Proteins/genetics; DNA-Binding Proteins/metabolism; Escherichia coli/physiology; Escherichia coli Proteins/genetics; Escherichia coli Proteins/metabolism; Flagella/physiology; Gene Expression Regulation, Bacterial; Molecular Sequence Data; Mutation; Promoter Regions, Genetic; Regulon; Trans-Activators/genetics; Trans-Activators/metabolism; Transcription, Genetic&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.3338.G567396bdab4a2&amp;amp;page=3338&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=1&amp;amp;template=PMID_info_table edit table]&amp;lt;/div&amp;gt; ||&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.3338.G567396bdab4a2--&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Main Points of the Paper ==&lt;br /&gt;
{{LitSignificance}}&lt;br /&gt;
&lt;br /&gt;
== Materials and Methods Used ==&lt;br /&gt;
{{LitMaterials}}&lt;br /&gt;
&lt;br /&gt;
==Phenotype Annotations==&lt;br /&gt;
{{AnnotationTableHelp}}&lt;br /&gt;
&amp;lt;protect&amp;gt;&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.3338.K567396bdb62d0--&amp;gt;&lt;br /&gt;
&amp;lt;!--&lt;br /&gt;
******************************************************************************************&lt;br /&gt;
* &lt;br /&gt;
*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** &lt;br /&gt;
* &lt;br /&gt;
****************************************************************************************** --&amp;gt;&lt;br /&gt;
{| border=&amp;quot;2&amp;quot; cellpadding=&amp;quot;4&amp;quot; cellspacing=&amp;quot;0&amp;quot; style=&amp;quot;margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;&amp;quot;  id=&amp;quot;K567396bdb62d0&amp;quot;  class=&amp;quot; tableEdit Phenotype_Table_2&amp;quot;  &lt;br /&gt;
|- align='left' bgcolor='#CCCCFF'&lt;br /&gt;
!|Phenotype of!!Taxon Information!!Genotype Information (if known)!!Condition Information!!OMP ID!!OMP Term Name!!ECO ID!!ECO Term Name!!Notes!!Status&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.3338.K567396bdb62d0&amp;amp;page=3338&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=0&amp;amp;template=Phenotype_Table_2 edit table]&amp;lt;/div&amp;gt; || || || || || || || || ||&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.3338.K567396bdb62d0--&amp;gt;&amp;lt;/protect&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Notes==&lt;br /&gt;
&lt;br /&gt;
==References==&lt;br /&gt;
{{RefHelp}}&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Publication]]&lt;/div&gt;</summary>
		<author><name>69.30.234.186</name></author>
		
	</entry>
	<entry>
		<id>https://microbialphenotypes.org/wiki/index.php?title=PMID:11929534&amp;diff=18264</id>
		<title>PMID:11929534</title>
		<link rel="alternate" type="text/html" href="https://microbialphenotypes.org/wiki/index.php?title=PMID:11929534&amp;diff=18264"/>
		<updated>2015-12-18T05:16:24Z</updated>

		<summary type="html">&lt;p&gt;69.30.234.186: Fill PMID: Page!&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{RightTOC}}&lt;br /&gt;
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&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.3338.H567396a893007--&amp;gt;&lt;br /&gt;
&amp;lt;!--&lt;br /&gt;
******************************************************************************************&lt;br /&gt;
* &lt;br /&gt;
*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** &lt;br /&gt;
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****************************************************************************************** --&amp;gt;&lt;br /&gt;
{|   id=&amp;quot;H567396a893007&amp;quot;  class=&amp;quot; tableEdit PMID_info_table&amp;quot;  &lt;br /&gt;
&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Citation&lt;br /&gt;
||&lt;br /&gt;
'''Sperandio, V, Torres, AG and Kaper, JB'''  (2002) Quorum sensing Escherichia coli regulators B and C (QseBC): a novel two-component regulatory system involved in the regulation of flagella and motility by quorum sensing in E. coli. ''Mol. Microbiol.'' '''43''':809-21&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Abstract&lt;br /&gt;
||&lt;br /&gt;
Quorum sensing is a cell-to-cell signalling mechanism in which bacteria secrete hormone-like compounds called autoinducers. When these auto-inducers reach a certain threshold concentration, they interact with bacterial transcriptional regulators, thereby regulating gene expression. Enterohaemorrhagic Escherichia coli (EHEC) O157:H7 as well as E. coli K-12 produces the autoinducer-2 (AI-2), which is synthesized by the product of the luxS gene, and previous work from our laboratory has shown that genes encoding the EHEC type III secretion system were activated by quorum sensing. Recently, by hybridizing an E. coli K-12 gene array with cDNA synthesized from RNA extracted from EHEC strain 86-24 and its isogenic luxS mutant, we observed that other potential virulence-associated factors, such as genes encoding the expression and assembly of flagella, motility and chemotaxis, were also activated by quorum sensing. The array data also indicated that several genes encoding putative E. coli regulators were controlled by quorum sensing. In this report, we describe a two-component system regulated by quorum sensing that shares homology with Salmonella typhimurium PmrAB, which we have named quorum sensing E. coli regulator B and C (QseBC). The qseBC genes, previously identified only as open reading frames b3025 and b3026, are organized in an operon in the E. coli chromosome, with qseB encoding the response regulator and qseC the sensor kinase. We confirmed the regulation of qseBC by quorum sensing using qseB::lacZ transcriptional fusions and characterized the phenotypes of an isogenic qseC mutation in EHEC. This mutant expressed less flagellin and had reduced motility compared with the wild-type and complemented strains. Transcription of flhD, fliA, motA and fliC::lacZ fusions was decreased in the qseC mutant, suggesting that qseBC is a transcriptional regulator of flagella genes. A qseC mutant was also generated in E. coli K-12 strain MC1000 that showed the same phenotypes as the EHEC mutant, indicating that qseBC regulates flagella and motility by quorum sensing in both EHEC and K-12. QseBC activates transcription of flhDC, which is the master regulator for the flagella and motility genes and, in the absence of flhD, QseBC failed to activate the transcription of fliA. Motility of a luxS, but not of a qseC, mutant can be restored by providing AI-2 exogenously as preconditioned media, suggesting that the qseC mutant is unable to respond to AI-2. However, QseC has no effect on the expression of other quorum sensing-controlled genes such as those encoding for the type III secretion system. These data indicate that QseBC is one component of the quorum-sensing regulatory cascade in both EHEC and K-12 that is involved in the regulation of flagella and motility genes, but that additional regulators in this cascade remain to be characterized.&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Links&lt;br /&gt;
||&lt;br /&gt;
[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;amp;db=pubmed&amp;amp;dopt=Abstract&amp;amp;list_uids=11929534 PubMed]&lt;br /&gt;
&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Keywords&lt;br /&gt;
||&lt;br /&gt;
DNA-Binding Proteins/genetics; DNA-Binding Proteins/metabolism; Escherichia coli/physiology; Escherichia coli Proteins/genetics; Escherichia coli Proteins/metabolism; Flagella/physiology; Gene Expression Regulation, Bacterial; Molecular Sequence Data; Mutation; Promoter Regions, Genetic; Regulon; Trans-Activators/genetics; Trans-Activators/metabolism; Transcription, Genetic&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.3338.H567396a893007&amp;amp;page=3338&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=1&amp;amp;template=PMID_info_table edit table]&amp;lt;/div&amp;gt; ||&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.3338.H567396a893007--&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Main Points of the Paper ==&lt;br /&gt;
{{LitSignificance}}&lt;br /&gt;
&lt;br /&gt;
== Materials and Methods Used ==&lt;br /&gt;
{{LitMaterials}}&lt;br /&gt;
&lt;br /&gt;
==Phenotype Annotations==&lt;br /&gt;
{{AnnotationTableHelp}}&lt;br /&gt;
&amp;lt;protect&amp;gt;&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.3338.J567396a89bef0--&amp;gt;&lt;br /&gt;
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*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** &lt;br /&gt;
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{| border=&amp;quot;2&amp;quot; cellpadding=&amp;quot;4&amp;quot; cellspacing=&amp;quot;0&amp;quot; style=&amp;quot;margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;&amp;quot;  id=&amp;quot;J567396a89bef0&amp;quot;  class=&amp;quot; tableEdit Phenotype_Table_2&amp;quot;  &lt;br /&gt;
|- align='left' bgcolor='#CCCCFF'&lt;br /&gt;
!|Phenotype of!!Taxon Information!!Genotype Information (if known)!!Condition Information!!OMP ID!!OMP Term Name!!ECO ID!!ECO Term Name!!Notes!!Status&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.3338.J567396a89bef0&amp;amp;page=3338&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=0&amp;amp;template=Phenotype_Table_2 edit table]&amp;lt;/div&amp;gt; || || || || || || || || ||&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.3338.J567396a89bef0--&amp;gt;&amp;lt;/protect&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Notes==&lt;br /&gt;
&lt;br /&gt;
==References==&lt;br /&gt;
{{RefHelp}}&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Publication]]&lt;/div&gt;</summary>
		<author><name>69.30.234.186</name></author>
		
	</entry>
	<entry>
		<id>https://microbialphenotypes.org/wiki/index.php?title=PMID:11929534&amp;diff=18263</id>
		<title>PMID:11929534</title>
		<link rel="alternate" type="text/html" href="https://microbialphenotypes.org/wiki/index.php?title=PMID:11929534&amp;diff=18263"/>
		<updated>2015-12-18T05:16:02Z</updated>

		<summary type="html">&lt;p&gt;69.30.234.186: Fill PMID: Page!&lt;/p&gt;
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{|   id=&amp;quot;P567396926fdda&amp;quot;  class=&amp;quot; tableEdit PMID_info_table&amp;quot;  &lt;br /&gt;
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!align=left align='left' bgcolor='#CCCCFF' |Citation&lt;br /&gt;
||&lt;br /&gt;
'''Sperandio, V, Torres, AG and Kaper, JB'''  (2002) Quorum sensing Escherichia coli regulators B and C (QseBC): a novel two-component regulatory system involved in the regulation of flagella and motility by quorum sensing in E. coli. ''Mol. Microbiol.'' '''43''':809-21&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Abstract&lt;br /&gt;
||&lt;br /&gt;
Quorum sensing is a cell-to-cell signalling mechanism in which bacteria secrete hormone-like compounds called autoinducers. When these auto-inducers reach a certain threshold concentration, they interact with bacterial transcriptional regulators, thereby regulating gene expression. Enterohaemorrhagic Escherichia coli (EHEC) O157:H7 as well as E. coli K-12 produces the autoinducer-2 (AI-2), which is synthesized by the product of the luxS gene, and previous work from our laboratory has shown that genes encoding the EHEC type III secretion system were activated by quorum sensing. Recently, by hybridizing an E. coli K-12 gene array with cDNA synthesized from RNA extracted from EHEC strain 86-24 and its isogenic luxS mutant, we observed that other potential virulence-associated factors, such as genes encoding the expression and assembly of flagella, motility and chemotaxis, were also activated by quorum sensing. The array data also indicated that several genes encoding putative E. coli regulators were controlled by quorum sensing. In this report, we describe a two-component system regulated by quorum sensing that shares homology with Salmonella typhimurium PmrAB, which we have named quorum sensing E. coli regulator B and C (QseBC). The qseBC genes, previously identified only as open reading frames b3025 and b3026, are organized in an operon in the E. coli chromosome, with qseB encoding the response regulator and qseC the sensor kinase. We confirmed the regulation of qseBC by quorum sensing using qseB::lacZ transcriptional fusions and characterized the phenotypes of an isogenic qseC mutation in EHEC. This mutant expressed less flagellin and had reduced motility compared with the wild-type and complemented strains. Transcription of flhD, fliA, motA and fliC::lacZ fusions was decreased in the qseC mutant, suggesting that qseBC is a transcriptional regulator of flagella genes. A qseC mutant was also generated in E. coli K-12 strain MC1000 that showed the same phenotypes as the EHEC mutant, indicating that qseBC regulates flagella and motility by quorum sensing in both EHEC and K-12. QseBC activates transcription of flhDC, which is the master regulator for the flagella and motility genes and, in the absence of flhD, QseBC failed to activate the transcription of fliA. Motility of a luxS, but not of a qseC, mutant can be restored by providing AI-2 exogenously as preconditioned media, suggesting that the qseC mutant is unable to respond to AI-2. However, QseC has no effect on the expression of other quorum sensing-controlled genes such as those encoding for the type III secretion system. These data indicate that QseBC is one component of the quorum-sensing regulatory cascade in both EHEC and K-12 that is involved in the regulation of flagella and motility genes, but that additional regulators in this cascade remain to be characterized.&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Links&lt;br /&gt;
||&lt;br /&gt;
[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;amp;db=pubmed&amp;amp;dopt=Abstract&amp;amp;list_uids=11929534 PubMed]&lt;br /&gt;
&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Keywords&lt;br /&gt;
||&lt;br /&gt;
DNA-Binding Proteins/genetics; DNA-Binding Proteins/metabolism; Escherichia coli/physiology; Escherichia coli Proteins/genetics; Escherichia coli Proteins/metabolism; Flagella/physiology; Gene Expression Regulation, Bacterial; Molecular Sequence Data; Mutation; Promoter Regions, Genetic; Regulon; Trans-Activators/genetics; Trans-Activators/metabolism; Transcription, Genetic&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.3338.P567396926fdda&amp;amp;page=3338&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=1&amp;amp;template=PMID_info_table edit table]&amp;lt;/div&amp;gt; ||&lt;br /&gt;
|}&lt;br /&gt;
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&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.3338.P567396926fdda--&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Main Points of the Paper ==&lt;br /&gt;
{{LitSignificance}}&lt;br /&gt;
&lt;br /&gt;
== Materials and Methods Used ==&lt;br /&gt;
{{LitMaterials}}&lt;br /&gt;
&lt;br /&gt;
==Phenotype Annotations==&lt;br /&gt;
{{AnnotationTableHelp}}&lt;br /&gt;
&amp;lt;protect&amp;gt;&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.3338.W5673969277527--&amp;gt;&lt;br /&gt;
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* &lt;br /&gt;
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{| border=&amp;quot;2&amp;quot; cellpadding=&amp;quot;4&amp;quot; cellspacing=&amp;quot;0&amp;quot; style=&amp;quot;margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;&amp;quot;  id=&amp;quot;W5673969277527&amp;quot;  class=&amp;quot; tableEdit Phenotype_Table_2&amp;quot;  &lt;br /&gt;
|- align='left' bgcolor='#CCCCFF'&lt;br /&gt;
!|Phenotype of!!Taxon Information!!Genotype Information (if known)!!Condition Information!!OMP ID!!OMP Term Name!!ECO ID!!ECO Term Name!!Notes!!Status&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.3338.W5673969277527&amp;amp;page=3338&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=0&amp;amp;template=Phenotype_Table_2 edit table]&amp;lt;/div&amp;gt; || || || || || || || || ||&lt;br /&gt;
|}&lt;br /&gt;
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&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.3338.W5673969277527--&amp;gt;&amp;lt;/protect&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Notes==&lt;br /&gt;
&lt;br /&gt;
==References==&lt;br /&gt;
{{RefHelp}}&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Publication]]&lt;/div&gt;</summary>
		<author><name>69.30.234.186</name></author>
		
	</entry>
	<entry>
		<id>https://microbialphenotypes.org/wiki/index.php?title=PMID:11929534&amp;diff=18262</id>
		<title>PMID:11929534</title>
		<link rel="alternate" type="text/html" href="https://microbialphenotypes.org/wiki/index.php?title=PMID:11929534&amp;diff=18262"/>
		<updated>2015-12-18T05:15:41Z</updated>

		<summary type="html">&lt;p&gt;69.30.234.186: Fill PMID: Page!&lt;/p&gt;
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*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** &lt;br /&gt;
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{|   id=&amp;quot;L5673967d63536&amp;quot;  class=&amp;quot; tableEdit PMID_info_table&amp;quot;  &lt;br /&gt;
&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Citation&lt;br /&gt;
||&lt;br /&gt;
'''Sperandio, V, Torres, AG and Kaper, JB'''  (2002) Quorum sensing Escherichia coli regulators B and C (QseBC): a novel two-component regulatory system involved in the regulation of flagella and motility by quorum sensing in E. coli. ''Mol. Microbiol.'' '''43''':809-21&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Abstract&lt;br /&gt;
||&lt;br /&gt;
Quorum sensing is a cell-to-cell signalling mechanism in which bacteria secrete hormone-like compounds called autoinducers. When these auto-inducers reach a certain threshold concentration, they interact with bacterial transcriptional regulators, thereby regulating gene expression. Enterohaemorrhagic Escherichia coli (EHEC) O157:H7 as well as E. coli K-12 produces the autoinducer-2 (AI-2), which is synthesized by the product of the luxS gene, and previous work from our laboratory has shown that genes encoding the EHEC type III secretion system were activated by quorum sensing. Recently, by hybridizing an E. coli K-12 gene array with cDNA synthesized from RNA extracted from EHEC strain 86-24 and its isogenic luxS mutant, we observed that other potential virulence-associated factors, such as genes encoding the expression and assembly of flagella, motility and chemotaxis, were also activated by quorum sensing. The array data also indicated that several genes encoding putative E. coli regulators were controlled by quorum sensing. In this report, we describe a two-component system regulated by quorum sensing that shares homology with Salmonella typhimurium PmrAB, which we have named quorum sensing E. coli regulator B and C (QseBC). The qseBC genes, previously identified only as open reading frames b3025 and b3026, are organized in an operon in the E. coli chromosome, with qseB encoding the response regulator and qseC the sensor kinase. We confirmed the regulation of qseBC by quorum sensing using qseB::lacZ transcriptional fusions and characterized the phenotypes of an isogenic qseC mutation in EHEC. This mutant expressed less flagellin and had reduced motility compared with the wild-type and complemented strains. Transcription of flhD, fliA, motA and fliC::lacZ fusions was decreased in the qseC mutant, suggesting that qseBC is a transcriptional regulator of flagella genes. A qseC mutant was also generated in E. coli K-12 strain MC1000 that showed the same phenotypes as the EHEC mutant, indicating that qseBC regulates flagella and motility by quorum sensing in both EHEC and K-12. QseBC activates transcription of flhDC, which is the master regulator for the flagella and motility genes and, in the absence of flhD, QseBC failed to activate the transcription of fliA. Motility of a luxS, but not of a qseC, mutant can be restored by providing AI-2 exogenously as preconditioned media, suggesting that the qseC mutant is unable to respond to AI-2. However, QseC has no effect on the expression of other quorum sensing-controlled genes such as those encoding for the type III secretion system. These data indicate that QseBC is one component of the quorum-sensing regulatory cascade in both EHEC and K-12 that is involved in the regulation of flagella and motility genes, but that additional regulators in this cascade remain to be characterized.&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Links&lt;br /&gt;
||&lt;br /&gt;
[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;amp;db=pubmed&amp;amp;dopt=Abstract&amp;amp;list_uids=11929534 PubMed]&lt;br /&gt;
&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Keywords&lt;br /&gt;
||&lt;br /&gt;
DNA-Binding Proteins/genetics; DNA-Binding Proteins/metabolism; Escherichia coli/physiology; Escherichia coli Proteins/genetics; Escherichia coli Proteins/metabolism; Flagella/physiology; Gene Expression Regulation, Bacterial; Molecular Sequence Data; Mutation; Promoter Regions, Genetic; Regulon; Trans-Activators/genetics; Trans-Activators/metabolism; Transcription, Genetic&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.3338.L5673967d63536&amp;amp;page=3338&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=1&amp;amp;template=PMID_info_table edit table]&amp;lt;/div&amp;gt; ||&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.3338.L5673967d63536--&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Main Points of the Paper ==&lt;br /&gt;
{{LitSignificance}}&lt;br /&gt;
&lt;br /&gt;
== Materials and Methods Used ==&lt;br /&gt;
{{LitMaterials}}&lt;br /&gt;
&lt;br /&gt;
==Phenotype Annotations==&lt;br /&gt;
{{AnnotationTableHelp}}&lt;br /&gt;
&amp;lt;protect&amp;gt;&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.3338.P5673967d6f4c2--&amp;gt;&lt;br /&gt;
&amp;lt;!--&lt;br /&gt;
******************************************************************************************&lt;br /&gt;
* &lt;br /&gt;
*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** &lt;br /&gt;
* &lt;br /&gt;
****************************************************************************************** --&amp;gt;&lt;br /&gt;
{| border=&amp;quot;2&amp;quot; cellpadding=&amp;quot;4&amp;quot; cellspacing=&amp;quot;0&amp;quot; style=&amp;quot;margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;&amp;quot;  id=&amp;quot;P5673967d6f4c2&amp;quot;  class=&amp;quot; tableEdit Phenotype_Table_2&amp;quot;  &lt;br /&gt;
|- align='left' bgcolor='#CCCCFF'&lt;br /&gt;
!|Phenotype of!!Taxon Information!!Genotype Information (if known)!!Condition Information!!OMP ID!!OMP Term Name!!ECO ID!!ECO Term Name!!Notes!!Status&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.3338.P5673967d6f4c2&amp;amp;page=3338&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=0&amp;amp;template=Phenotype_Table_2 edit table]&amp;lt;/div&amp;gt; || || || || || || || || ||&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.3338.P5673967d6f4c2--&amp;gt;&amp;lt;/protect&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Notes==&lt;br /&gt;
&lt;br /&gt;
==References==&lt;br /&gt;
{{RefHelp}}&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Publication]]&lt;/div&gt;</summary>
		<author><name>69.30.234.186</name></author>
		
	</entry>
	<entry>
		<id>https://microbialphenotypes.org/wiki/index.php?title=PMID:11929534&amp;diff=18261</id>
		<title>PMID:11929534</title>
		<link rel="alternate" type="text/html" href="https://microbialphenotypes.org/wiki/index.php?title=PMID:11929534&amp;diff=18261"/>
		<updated>2015-12-18T05:15:20Z</updated>

		<summary type="html">&lt;p&gt;69.30.234.186: Fill PMID: Page!&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{RightTOC}}&lt;br /&gt;
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&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.3338.I567396675982e--&amp;gt;&lt;br /&gt;
&amp;lt;!--&lt;br /&gt;
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* &lt;br /&gt;
*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** &lt;br /&gt;
* &lt;br /&gt;
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{|   id=&amp;quot;I567396675982e&amp;quot;  class=&amp;quot; tableEdit PMID_info_table&amp;quot;  &lt;br /&gt;
&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Citation&lt;br /&gt;
||&lt;br /&gt;
'''Sperandio, V, Torres, AG and Kaper, JB'''  (2002) Quorum sensing Escherichia coli regulators B and C (QseBC): a novel two-component regulatory system involved in the regulation of flagella and motility by quorum sensing in E. coli. ''Mol. Microbiol.'' '''43''':809-21&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Abstract&lt;br /&gt;
||&lt;br /&gt;
Quorum sensing is a cell-to-cell signalling mechanism in which bacteria secrete hormone-like compounds called autoinducers. When these auto-inducers reach a certain threshold concentration, they interact with bacterial transcriptional regulators, thereby regulating gene expression. Enterohaemorrhagic Escherichia coli (EHEC) O157:H7 as well as E. coli K-12 produces the autoinducer-2 (AI-2), which is synthesized by the product of the luxS gene, and previous work from our laboratory has shown that genes encoding the EHEC type III secretion system were activated by quorum sensing. Recently, by hybridizing an E. coli K-12 gene array with cDNA synthesized from RNA extracted from EHEC strain 86-24 and its isogenic luxS mutant, we observed that other potential virulence-associated factors, such as genes encoding the expression and assembly of flagella, motility and chemotaxis, were also activated by quorum sensing. The array data also indicated that several genes encoding putative E. coli regulators were controlled by quorum sensing. In this report, we describe a two-component system regulated by quorum sensing that shares homology with Salmonella typhimurium PmrAB, which we have named quorum sensing E. coli regulator B and C (QseBC). The qseBC genes, previously identified only as open reading frames b3025 and b3026, are organized in an operon in the E. coli chromosome, with qseB encoding the response regulator and qseC the sensor kinase. We confirmed the regulation of qseBC by quorum sensing using qseB::lacZ transcriptional fusions and characterized the phenotypes of an isogenic qseC mutation in EHEC. This mutant expressed less flagellin and had reduced motility compared with the wild-type and complemented strains. Transcription of flhD, fliA, motA and fliC::lacZ fusions was decreased in the qseC mutant, suggesting that qseBC is a transcriptional regulator of flagella genes. A qseC mutant was also generated in E. coli K-12 strain MC1000 that showed the same phenotypes as the EHEC mutant, indicating that qseBC regulates flagella and motility by quorum sensing in both EHEC and K-12. QseBC activates transcription of flhDC, which is the master regulator for the flagella and motility genes and, in the absence of flhD, QseBC failed to activate the transcription of fliA. Motility of a luxS, but not of a qseC, mutant can be restored by providing AI-2 exogenously as preconditioned media, suggesting that the qseC mutant is unable to respond to AI-2. However, QseC has no effect on the expression of other quorum sensing-controlled genes such as those encoding for the type III secretion system. These data indicate that QseBC is one component of the quorum-sensing regulatory cascade in both EHEC and K-12 that is involved in the regulation of flagella and motility genes, but that additional regulators in this cascade remain to be characterized.&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Links&lt;br /&gt;
||&lt;br /&gt;
[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;amp;db=pubmed&amp;amp;dopt=Abstract&amp;amp;list_uids=11929534 PubMed]&lt;br /&gt;
&lt;br /&gt;
|-&lt;br /&gt;
!align=left align='left' bgcolor='#CCCCFF' |Keywords&lt;br /&gt;
||&lt;br /&gt;
DNA-Binding Proteins/genetics; DNA-Binding Proteins/metabolism; Escherichia coli/physiology; Escherichia coli Proteins/genetics; Escherichia coli Proteins/metabolism; Flagella/physiology; Gene Expression Regulation, Bacterial; Molecular Sequence Data; Mutation; Promoter Regions, Genetic; Regulon; Trans-Activators/genetics; Trans-Activators/metabolism; Transcription, Genetic&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
|&amp;lt;div class=&amp;quot;tableEdit_editLink plainlinks&amp;quot;&amp;gt;[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&amp;amp;id=d41d8cd98f00b204e9800998ecf8427e.3338.I567396675982e&amp;amp;page=3338&amp;amp;pagename={{FULLPAGENAMEE}}&amp;amp;type=1&amp;amp;template=PMID_info_table edit table]&amp;lt;/div&amp;gt; ||&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!-- OMP category tags --&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.3338.I567396675982e--&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Main Points of the Paper ==&lt;br /&gt;
{{LitSignificance}}&lt;br /&gt;
&lt;br /&gt;
== Materials and Methods Used ==&lt;br /&gt;
{{LitMaterials}}&lt;br /&gt;
&lt;br /&gt;
==Phenotype Annotations==&lt;br /&gt;
{{AnnotationTableHelp}}&lt;br /&gt;
&amp;lt;protect&amp;gt;&amp;lt;!--box uid=d41d8cd98f00b204e9800998ecf8427e.3338.E5673966831395--&amp;gt;&lt;br /&gt;
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!|Phenotype of!!Taxon Information!!Genotype Information (if known)!!Condition Information!!OMP ID!!OMP Term Name!!ECO ID!!ECO Term Name!!Notes!!Status&lt;br /&gt;
&lt;br /&gt;
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==Notes==&lt;br /&gt;
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[[Category:Publication]]&lt;/div&gt;</summary>
		<author><name>69.30.234.186</name></author>
		
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